Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 RPL5P21-201ENST00000404620 815 ntBASIC13.21□□□□□ -0.29
BEST4Q8NFU0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 AL139010.1-201ENST00000454878 894 ntBASIC13.21□□□□□ -0.29
BEST4Q8NFU0 AC079776.4-201ENST00000511039 504 ntBASIC13.21□□□□□ -0.29
BEST4Q8NFU0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 RARRES2P8-201ENST00000566335 367 ntBASIC13.21□□□□□ -0.29
BEST4Q8NFU0 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
BEST4Q8NFU0 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
BEST4Q8NFU0 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
BEST4Q8NFU0 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.21□□□□□ -0.3
BEST4Q8NFU0 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
BEST4Q8NFU0 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
BEST4Q8NFU0 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
BEST4Q8NFU0 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
BEST4Q8NFU0 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.21□□□□□ -0.3
BEST4Q8NFU0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
BEST4Q8NFU0 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
BEST4Q8NFU0 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
BEST4Q8NFU0 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
BEST4Q8NFU0 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.21□□□□□ -0.3
BEST4Q8NFU0 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
BEST4Q8NFU0 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
BEST4Q8NFU0 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
BEST4Q8NFU0 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
BEST4Q8NFU0 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 CR383656.2-201ENST00000548656 2254 ntBASIC13.2□□□□□ -0.3
BEST4Q8NFU0 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 EEF1DP4-201ENST00000446006 880 ntBASIC13.2□□□□□ -0.3
BEST4Q8NFU0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 AC079781.3-201ENST00000449110 356 ntBASIC13.2□□□□□ -0.3
BEST4Q8NFU0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 IGHV3-22-201ENST00000520721 359 ntBASIC13.2□□□□□ -0.3
BEST4Q8NFU0 AC112191.1-201ENST00000523689 701 ntBASIC13.2□□□□□ -0.3
BEST4Q8NFU0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 AC018845.2-201ENST00000568326 409 ntBASIC13.2□□□□□ -0.3
BEST4Q8NFU0 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms