Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 FAM220BP-201ENST00000377689 816 ntBASIC14.86□□□□□ -0.03
HIPK4Q8NE63 TFAMP1-201ENST00000412727 736 ntBASIC14.86□□□□□ -0.03
HIPK4Q8NE63 AL355306.1-201ENST00000415580 579 ntBASIC14.86□□□□□ -0.03
HIPK4Q8NE63 AC142381.1-201ENST00000426099 345 ntBASIC14.86□□□□□ -0.03
HIPK4Q8NE63 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 AL135744.1-201ENST00000565098 629 ntBASIC14.86□□□□□ -0.03
HIPK4Q8NE63 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 AL121894.2-201ENST00000602977 491 ntBASIC14.86□□□□□ -0.03
HIPK4Q8NE63 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 IL9RP2-201ENST00000423948 1312 ntBASIC14.86□□□□□ -0.03
HIPK4Q8NE63 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIPK4Q8NE63 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 AC152010.1-201ENST00000415779 2006 ntBASIC14.85□□□□□ -0.03
HIPK4Q8NE63 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 AL671277.1-201ENST00000429656 993 ntBASIC14.85□□□□□ -0.03
HIPK4Q8NE63 AL591424.1-201ENST00000442569 1213 ntBASIC14.85□□□□□ -0.03
HIPK4Q8NE63 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 FAM86C2P-203ENST00000528684 1004 ntBASIC14.85□□□□□ -0.03
HIPK4Q8NE63 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 AL450472.2-201ENST00000603663 1156 ntBASIC14.85□□□□□ -0.03
HIPK4Q8NE63 AC092865.6-201ENST00000642101 219 ntBASIC14.85□□□□□ -0.03
HIPK4Q8NE63 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 AC099521.3-201ENST00000624251 2938 ntBASIC14.85□□□□□ -0.03
HIPK4Q8NE63 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIPK4Q8NE63 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.84□□□□□ -0.03
HIPK4Q8NE63 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HIPK4Q8NE63 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HIPK4Q8NE63 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIPK4Q8NE63 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HIPK4Q8NE63 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
HIPK4Q8NE63 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.84□□□□□ -0.03
HIPK4Q8NE63 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIPK4Q8NE63 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
HIPK4Q8NE63 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HIPK4Q8NE63 DGCR9-201ENST00000609630 2415 ntBASIC14.84□□□□□ -0.03
HIPK4Q8NE63 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.84□□□□□ -0.03
HIPK4Q8NE63 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HIPK4Q8NE63 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIPK4Q8NE63 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIPK4Q8NE63 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HIPK4Q8NE63 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
HIPK4Q8NE63 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms