Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
C3orf56Q8N813 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC11.93□□□□□ -0.5
C3orf56Q8N813 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
C3orf56Q8N813 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 DPM3-202ENST00000368399 517 ntBASIC11.93□□□□□ -0.5
C3orf56Q8N813 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC11.93□□□□□ -0.5
C3orf56Q8N813 PARVG-202ENST00000415224 999 ntTSL 2 BASIC11.93□□□□□ -0.5
C3orf56Q8N813 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC11.93□□□□□ -0.5
C3orf56Q8N813 DNAJB1P1-201ENST00000429417 1024 ntBASIC11.93□□□□□ -0.5
C3orf56Q8N813 RNMTL1P1-201ENST00000454103 560 ntBASIC11.93□□□□□ -0.5
C3orf56Q8N813 TUBB8P8-201ENST00000458717 1058 ntBASIC11.93□□□□□ -0.5
C3orf56Q8N813 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC11.93□□□□□ -0.5
C3orf56Q8N813 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC11.93□□□□□ -0.5
C3orf56Q8N813 AC135983.4-201ENST00000564116 1262 ntBASIC11.93□□□□□ -0.5
C3orf56Q8N813 INO80C-210ENST00000590757 595 ntTSL 2 BASIC11.93□□□□□ -0.5
C3orf56Q8N813 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC11.93□□□□□ -0.5
C3orf56Q8N813 AL353770.1-201ENST00000614915 403 ntBASIC11.93□□□□□ -0.5
C3orf56Q8N813 AP001065.2-201ENST00000617205 644 ntBASIC11.93□□□□□ -0.5
C3orf56Q8N813 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC11.93□□□□□ -0.5
C3orf56Q8N813 AC103691.2-201ENST00000618824 433 ntBASIC11.93□□□□□ -0.5
C3orf56Q8N813 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC11.93□□□□□ -0.5
C3orf56Q8N813 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC11.93□□□□□ -0.5
C3orf56Q8N813 AC004923.1-202ENST00000642106 209 ntBASIC11.93□□□□□ -0.5
C3orf56Q8N813 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
C3orf56Q8N813 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC11.93□□□□□ -0.5
C3orf56Q8N813 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
C3orf56Q8N813 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 AC132872.4-202ENST00000622924 2756 ntBASIC11.93□□□□□ -0.5
C3orf56Q8N813 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
C3orf56Q8N813 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
C3orf56Q8N813 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
C3orf56Q8N813 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC11.93□□□□□ -0.5
C3orf56Q8N813 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
C3orf56Q8N813 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC11.93□□□□□ -0.5
C3orf56Q8N813 AC060834.1-201ENST00000443027 2032 ntBASIC11.93□□□□□ -0.5
C3orf56Q8N813 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
C3orf56Q8N813 AC104581.4-201ENST00000623126 3052 ntBASIC11.92□□□□□ -0.5
C3orf56Q8N813 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
C3orf56Q8N813 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
C3orf56Q8N813 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
C3orf56Q8N813 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
C3orf56Q8N813 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC11.92□□□□□ -0.5
C3orf56Q8N813 AC148477.4-201ENST00000613430 1793 ntBASIC11.92□□□□□ -0.5
C3orf56Q8N813 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
C3orf56Q8N813 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
C3orf56Q8N813 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
C3orf56Q8N813 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
C3orf56Q8N813 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
C3orf56Q8N813 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
C3orf56Q8N813 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
C3orf56Q8N813 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
C3orf56Q8N813 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
C3orf56Q8N813 CTBP1-AS2-206ENST00000581398 5652 ntBASIC11.92□□□□□ -0.5
C3orf56Q8N813 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
C3orf56Q8N813 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
C3orf56Q8N813 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC11.92□□□□□ -0.5
C3orf56Q8N813 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
C3orf56Q8N813 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC11.92□□□□□ -0.5
C3orf56Q8N813 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC11.92□□□□□ -0.5
C3orf56Q8N813 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
C3orf56Q8N813 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
C3orf56Q8N813 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC11.92□□□□□ -0.5
C3orf56Q8N813 AC026316.1-201ENST00000398900 414 ntBASIC11.92□□□□□ -0.5
C3orf56Q8N813 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC11.92□□□□□ -0.5
C3orf56Q8N813 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC11.92□□□□□ -0.5
C3orf56Q8N813 AC079112.1-201ENST00000454972 939 ntBASIC11.92□□□□□ -0.5
C3orf56Q8N813 RN7SL181P-201ENST00000462921 277 ntBASIC11.92□□□□□ -0.5
C3orf56Q8N813 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC11.92□□□□□ -0.5
C3orf56Q8N813 AC125604.1-201ENST00000496255 707 ntBASIC11.92□□□□□ -0.5
C3orf56Q8N813 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC11.92□□□□□ -0.5
C3orf56Q8N813 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
C3orf56Q8N813 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC11.92□□□□□ -0.5
C3orf56Q8N813 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
C3orf56Q8N813 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC11.92□□□□□ -0.5
C3orf56Q8N813 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC11.92□□□□□ -0.5
C3orf56Q8N813 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms