Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
C11orf42Q8N5U0 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 AL359183.1-201ENST00000623796 2132 ntBASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 AL035633.1-201ENST00000406139 838 ntBASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 AL442647.2-201ENST00000429864 857 ntBASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 TAF8-206ENST00000472818 719 ntTSL 2 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 AC104596.2-201ENST00000512793 793 ntBASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 AC026410.3-201ENST00000514280 936 ntBASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 AC025048.6-201ENST00000634326 1161 ntBASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 AL645728.2-202ENST00000641679 227 ntBASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 C18orf15-201ENST00000623680 2534 ntBASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 AC107918.4-201ENST00000641966 3141 ntBASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 AC006058.4-201ENST00000624016 1670 ntBASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 AC013268.4-201ENST00000637413 2228 ntBASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.73□□□□□ -0.37
C11orf42Q8N5U0 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.72□□□□□ -0.37
C11orf42Q8N5U0 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
C11orf42Q8N5U0 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf42Q8N5U0 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf42Q8N5U0 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf42Q8N5U0 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf42Q8N5U0 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf42Q8N5U0 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
C11orf42Q8N5U0 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf42Q8N5U0 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.72□□□□□ -0.37
C11orf42Q8N5U0 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.72□□□□□ -0.37
C11orf42Q8N5U0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf42Q8N5U0 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
C11orf42Q8N5U0 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf42Q8N5U0 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf42Q8N5U0 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf42Q8N5U0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms