Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SIX5Q8N196 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SIX5Q8N196 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SIX5Q8N196 ME2P1-201ENST00000426028 1970 ntBASIC15.58■□□□□ 0.09
SIX5Q8N196 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.58■□□□□ 0.09
SIX5Q8N196 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.58■□□□□ 0.09
SIX5Q8N196 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
SIX5Q8N196 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.58■□□□□ 0.09
SIX5Q8N196 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SIX5Q8N196 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
SIX5Q8N196 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SIX5Q8N196 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SIX5Q8N196 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
SIX5Q8N196 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SIX5Q8N196 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SIX5Q8N196 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SIX5Q8N196 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
SIX5Q8N196 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SIX5Q8N196 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SIX5Q8N196 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.58■□□□□ 0.08
SIX5Q8N196 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC15.58■□□□□ 0.08
SIX5Q8N196 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC15.58■□□□□ 0.08
SIX5Q8N196 AC006335.1-201ENST00000445200 547 ntBASIC15.58■□□□□ 0.08
SIX5Q8N196 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.58■□□□□ 0.08
SIX5Q8N196 AC104073.2-201ENST00000453737 312 ntBASIC15.58■□□□□ 0.08
SIX5Q8N196 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SIX5Q8N196 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SIX5Q8N196 AL353770.1-201ENST00000614915 403 ntBASIC15.58■□□□□ 0.08
SIX5Q8N196 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SIX5Q8N196 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SIX5Q8N196 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.58■□□□□ 0.08
SIX5Q8N196 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.58■□□□□ 0.08
SIX5Q8N196 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SIX5Q8N196 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SIX5Q8N196 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SIX5Q8N196 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SIX5Q8N196 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
SIX5Q8N196 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SIX5Q8N196 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SIX5Q8N196 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.58■□□□□ 0.08
SIX5Q8N196 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SIX5Q8N196 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SIX5Q8N196 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SIX5Q8N196 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.57■□□□□ 0.08
SIX5Q8N196 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.57■□□□□ 0.08
SIX5Q8N196 AL158070.2-201ENST00000623713 1621 ntBASIC15.57■□□□□ 0.08
SIX5Q8N196 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.57■□□□□ 0.08
SIX5Q8N196 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SIX5Q8N196 AL157791.1-201ENST00000553667 1699 ntBASIC15.57■□□□□ 0.08
SIX5Q8N196 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SIX5Q8N196 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.57■□□□□ 0.08
SIX5Q8N196 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.57■□□□□ 0.08
SIX5Q8N196 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SIX5Q8N196 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.57■□□□□ 0.08
SIX5Q8N196 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SIX5Q8N196 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SIX5Q8N196 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
SIX5Q8N196 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.57■□□□□ 0.08
SIX5Q8N196 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SIX5Q8N196 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SIX5Q8N196 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SIX5Q8N196 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC15.57■□□□□ 0.08
SIX5Q8N196 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.57■□□□□ 0.08
SIX5Q8N196 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SIX5Q8N196 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SIX5Q8N196 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC15.57■□□□□ 0.08
SIX5Q8N196 EIF3FP3-201ENST00000434851 1086 ntBASIC15.57■□□□□ 0.08
SIX5Q8N196 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SIX5Q8N196 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
SIX5Q8N196 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SIX5Q8N196 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.57■□□□□ 0.08
SIX5Q8N196 MIR4313-201ENST00000580760 101 ntBASIC15.57■□□□□ 0.08
SIX5Q8N196 AC020922.3-201ENST00000595064 547 ntBASIC15.57■□□□□ 0.08
SIX5Q8N196 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SIX5Q8N196 AC012044.1-201ENST00000603431 297 ntBASIC15.57■□□□□ 0.08
SIX5Q8N196 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.57■□□□□ 0.08
SIX5Q8N196 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.57■□□□□ 0.08
SIX5Q8N196 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC15.57■□□□□ 0.08
SIX5Q8N196 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
SIX5Q8N196 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SIX5Q8N196 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SIX5Q8N196 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SIX5Q8N196 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SIX5Q8N196 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SIX5Q8N196 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SIX5Q8N196 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SIX5Q8N196 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.57■□□□□ 0.08
SIX5Q8N196 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.57■□□□□ 0.08
SIX5Q8N196 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
SIX5Q8N196 AC004899.1-201ENST00000424687 1714 ntBASIC15.57■□□□□ 0.08
SIX5Q8N196 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SIX5Q8N196 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SIX5Q8N196 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.57■□□□□ 0.08
SIX5Q8N196 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIX5Q8N196 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SIX5Q8N196 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.56■□□□□ 0.08
SIX5Q8N196 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SIX5Q8N196 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SIX5Q8N196 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.56■□□□□ 0.08
SIX5Q8N196 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms