Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 AL157414.3-201ENST00000624276 1954 ntBASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 AC140479.7-201ENST00000636301 2332 ntBASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 AC117489.1-201ENST00000625169 3217 ntBASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 AC005912.2-201ENST00000619492 2400 ntBASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00346Q8IVM7 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 AL391069.4-201ENST00000609583 481 ntBASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00346Q8IVM7 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms