Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CROCCP3Q8IVE0 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 RPL5P21-201ENST00000404620 815 ntBASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 SCARNA2-201ENST00000458748 420 ntBASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 AC002347.1-201ENST00000569543 541 ntBASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 AC011467.4-201ENST00000594891 528 ntBASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.82□□□□□ -0.2
CROCCP3Q8IVE0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.81□□□□□ -0.2
CROCCP3Q8IVE0 NPTN-IT1-201ENST00000628401 2283 ntBASIC13.81□□□□□ -0.2
CROCCP3Q8IVE0 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CROCCP3Q8IVE0 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.81□□□□□ -0.2
CROCCP3Q8IVE0 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
CROCCP3Q8IVE0 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CROCCP3Q8IVE0 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CROCCP3Q8IVE0 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CROCCP3Q8IVE0 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.81□□□□□ -0.2
CROCCP3Q8IVE0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
CROCCP3Q8IVE0 FAM90A12P-201ENST00000519497 2375 ntBASIC13.81□□□□□ -0.2
CROCCP3Q8IVE0 FAM90A24P-201ENST00000520792 2369 ntBASIC13.81□□□□□ -0.2
CROCCP3Q8IVE0 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CROCCP3Q8IVE0 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CROCCP3Q8IVE0 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CROCCP3Q8IVE0 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.81□□□□□ -0.2
CROCCP3Q8IVE0 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms