Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.44■□□□□ 0.06
PACS2Q86VP3 HTR4-207ENST00000520514 1236 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PACS2Q86VP3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PACS2Q86VP3 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC15.44■□□□□ 0.06
PACS2Q86VP3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.44■□□□□ 0.06
PACS2Q86VP3 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC15.44■□□□□ 0.06
PACS2Q86VP3 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.44■□□□□ 0.06
PACS2Q86VP3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.44■□□□□ 0.06
PACS2Q86VP3 AP001350.2-201ENST00000625104 1094 ntBASIC15.44■□□□□ 0.06
PACS2Q86VP3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.44■□□□□ 0.06
PACS2Q86VP3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PACS2Q86VP3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PACS2Q86VP3 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC15.44■□□□□ 0.06
PACS2Q86VP3 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PACS2Q86VP3 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PACS2Q86VP3 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
PACS2Q86VP3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PACS2Q86VP3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PACS2Q86VP3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PACS2Q86VP3 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PACS2Q86VP3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PACS2Q86VP3 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PACS2Q86VP3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.44■□□□□ 0.06
PACS2Q86VP3 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PACS2Q86VP3 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PACS2Q86VP3 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PACS2Q86VP3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PACS2Q86VP3 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PACS2Q86VP3 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
PACS2Q86VP3 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PACS2Q86VP3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.43■□□□□ 0.06
PACS2Q86VP3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.43■□□□□ 0.06
PACS2Q86VP3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PACS2Q86VP3 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PACS2Q86VP3 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PACS2Q86VP3 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC15.43■□□□□ 0.06
PACS2Q86VP3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PACS2Q86VP3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.43■□□□□ 0.06
PACS2Q86VP3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PACS2Q86VP3 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PACS2Q86VP3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PACS2Q86VP3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PACS2Q86VP3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PACS2Q86VP3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.43■□□□□ 0.06
PACS2Q86VP3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
PACS2Q86VP3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PACS2Q86VP3 MIR1233-2-201ENST00000408138 82 ntBASIC15.43■□□□□ 0.06
PACS2Q86VP3 MIR1233-1-201ENST00000408722 82 ntBASIC15.43■□□□□ 0.06
PACS2Q86VP3 UPF3AP3-201ENST00000420996 769 ntBASIC15.43■□□□□ 0.06
PACS2Q86VP3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.43■□□□□ 0.06
PACS2Q86VP3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.43■□□□□ 0.06
PACS2Q86VP3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.43■□□□□ 0.06
PACS2Q86VP3 AC099542.2-201ENST00000474149 553 ntTSL 2 BASIC15.43■□□□□ 0.06
PACS2Q86VP3 AL031432.2-201ENST00000566714 459 ntBASIC15.43■□□□□ 0.06
PACS2Q86VP3 AL928711.1-201ENST00000570165 459 ntBASIC15.43■□□□□ 0.06
PACS2Q86VP3 AC091167.2-201ENST00000579581 588 ntBASIC15.43■□□□□ 0.06
PACS2Q86VP3 MIR4515-201ENST00000584082 81 ntBASIC15.43■□□□□ 0.06
PACS2Q86VP3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PACS2Q86VP3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PACS2Q86VP3 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PACS2Q86VP3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PACS2Q86VP3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PACS2Q86VP3 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC15.43■□□□□ 0.06
PACS2Q86VP3 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PACS2Q86VP3 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PACS2Q86VP3 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC15.43■□□□□ 0.06
PACS2Q86VP3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PACS2Q86VP3 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PACS2Q86VP3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
PACS2Q86VP3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
PACS2Q86VP3 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
PACS2Q86VP3 AC005622.1-201ENST00000636801 1703 ntBASIC15.43■□□□□ 0.06
PACS2Q86VP3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PACS2Q86VP3 AC012569.1-201ENST00000591191 1524 ntBASIC15.43■□□□□ 0.06
PACS2Q86VP3 AC015802.1-201ENST00000588104 1449 ntBASIC15.43■□□□□ 0.06
PACS2Q86VP3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
PACS2Q86VP3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PACS2Q86VP3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PACS2Q86VP3 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PACS2Q86VP3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PACS2Q86VP3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PACS2Q86VP3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PACS2Q86VP3 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
PACS2Q86VP3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PACS2Q86VP3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PACS2Q86VP3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.42■□□□□ 0.06
PACS2Q86VP3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PACS2Q86VP3 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PACS2Q86VP3 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PACS2Q86VP3 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
PACS2Q86VP3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
PACS2Q86VP3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.42■□□□□ 0.06
PACS2Q86VP3 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC15.42■□□□□ 0.06
PACS2Q86VP3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PACS2Q86VP3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.42■□□□□ 0.06
PACS2Q86VP3 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PACS2Q86VP3 RPS20P25-201ENST00000412447 352 ntBASIC15.42■□□□□ 0.06
PACS2Q86VP3 HCG4-201ENST00000418983 998 ntBASIC15.42■□□□□ 0.06
PACS2Q86VP3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.42■□□□□ 0.06
PACS2Q86VP3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms