Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDCP2Q5VXM1 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDCP2Q5VXM1 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDCP2Q5VXM1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDCP2Q5VXM1 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDCP2Q5VXM1 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDCP2Q5VXM1 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.31□□□□□ -0.12
CDCP2Q5VXM1 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 AC244394.1-201ENST00000435000 1665 ntBASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 FGFR3P1-201ENST00000449999 601 ntBASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 MIR4750-201ENST00000584564 56 ntBASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 AC008805.1-201ENST00000590892 364 ntBASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 AL138725.1-201ENST00000407347 1314 ntBASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 AL008718.2-201ENST00000609206 1313 ntBASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 AC006449.5-201ENST00000610658 2098 ntBASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDCP2Q5VXM1 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 AL137783.1-201ENST00000623494 1896 ntBASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 RN7SL181P-201ENST00000462921 277 ntBASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 NPM1P43-201ENST00000558669 786 ntBASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 COX6A1P2-201ENST00000620597 330 ntBASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDCP2Q5VXM1 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms