Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 AL137784.3-201ENST00000623858 2288 ntBASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 KRT18P64-201ENST00000434946 1219 ntBASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 ALG1L8P-201ENST00000533887 760 ntBASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 RN7SL828P-201ENST00000607615 303 ntBASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 AC003101.2-201ENST00000612557 442 ntBASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 Z97205.2-201ENST00000564697 1639 ntBASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 ADAMTS7P1-201ENST00000613213 4793 ntBASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 CYP2AB1P-202ENST00000454440 1456 ntBASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00242Q5T6M2 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 AC005252.3-201ENST00000623855 2258 ntBASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00242Q5T6M2 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC10.41□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms