Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USH1GQ495M9 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
USH1GQ495M9 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.38■□□□□ 0.37
USH1GQ495M9 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USH1GQ495M9 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
USH1GQ495M9 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.38■□□□□ 0.37
USH1GQ495M9 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.38■□□□□ 0.37
USH1GQ495M9 KRT8P4-201ENST00000509735 1454 ntBASIC17.38■□□□□ 0.37
USH1GQ495M9 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USH1GQ495M9 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USH1GQ495M9 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.38■□□□□ 0.37
USH1GQ495M9 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USH1GQ495M9 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USH1GQ495M9 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
USH1GQ495M9 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USH1GQ495M9 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
USH1GQ495M9 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USH1GQ495M9 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USH1GQ495M9 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USH1GQ495M9 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
USH1GQ495M9 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USH1GQ495M9 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.38■□□□□ 0.37
USH1GQ495M9 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USH1GQ495M9 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USH1GQ495M9 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USH1GQ495M9 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.38■□□□□ 0.37
USH1GQ495M9 AC106820.3-201ENST00000561653 397 ntBASIC17.38■□□□□ 0.37
USH1GQ495M9 PPY2P-201ENST00000582808 702 ntBASIC17.38■□□□□ 0.37
USH1GQ495M9 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USH1GQ495M9 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.38■□□□□ 0.37
USH1GQ495M9 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.38■□□□□ 0.37
USH1GQ495M9 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.38■□□□□ 0.37
USH1GQ495M9 AC073413.1-201ENST00000603927 732 ntBASIC17.38■□□□□ 0.37
USH1GQ495M9 AC138466.3-201ENST00000619983 221 ntBASIC17.38■□□□□ 0.37
USH1GQ495M9 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USH1GQ495M9 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.38■□□□□ 0.37
USH1GQ495M9 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USH1GQ495M9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
USH1GQ495M9 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
USH1GQ495M9 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
USH1GQ495M9 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.38■□□□□ 0.37
USH1GQ495M9 LINC00554-201ENST00000564841 3011 ntBASIC17.38■□□□□ 0.37
USH1GQ495M9 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.38■□□□□ 0.37
USH1GQ495M9 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
USH1GQ495M9 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USH1GQ495M9 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
USH1GQ495M9 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.38■□□□□ 0.37
USH1GQ495M9 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USH1GQ495M9 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.37■□□□□ 0.37
USH1GQ495M9 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.37■□□□□ 0.37
USH1GQ495M9 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
USH1GQ495M9 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.37■□□□□ 0.37
USH1GQ495M9 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.37■□□□□ 0.37
USH1GQ495M9 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USH1GQ495M9 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
USH1GQ495M9 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.37■□□□□ 0.37
USH1GQ495M9 AC091951.1-201ENST00000512854 2465 ntBASIC17.37■□□□□ 0.37
USH1GQ495M9 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USH1GQ495M9 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USH1GQ495M9 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
USH1GQ495M9 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.37■□□□□ 0.37
USH1GQ495M9 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.37■□□□□ 0.37
USH1GQ495M9 AC007969.1-201ENST00000433675 447 ntBASIC17.37■□□□□ 0.37
USH1GQ495M9 MTX1P1-201ENST00000440904 838 ntBASIC17.37■□□□□ 0.37
USH1GQ495M9 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.37■□□□□ 0.37
USH1GQ495M9 AC022494.1-201ENST00000466044 728 ntBASIC17.37■□□□□ 0.37
USH1GQ495M9 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.37■□□□□ 0.37
USH1GQ495M9 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USH1GQ495M9 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.37■□□□□ 0.37
USH1GQ495M9 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
USH1GQ495M9 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.37■□□□□ 0.37
USH1GQ495M9 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.37■□□□□ 0.37
USH1GQ495M9 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.37■□□□□ 0.37
USH1GQ495M9 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
USH1GQ495M9 RN7SL713P-201ENST00000582127 302 ntBASIC17.37■□□□□ 0.37
USH1GQ495M9 EEF1DP1-201ENST00000585891 896 ntBASIC17.37■□□□□ 0.37
USH1GQ495M9 AC243960.2-201ENST00000600996 747 ntBASIC17.37■□□□□ 0.37
USH1GQ495M9 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.37■□□□□ 0.37
USH1GQ495M9 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
USH1GQ495M9 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
USH1GQ495M9 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USH1GQ495M9 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USH1GQ495M9 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USH1GQ495M9 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
USH1GQ495M9 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
USH1GQ495M9 LILRP1-201ENST00000444199 1370 ntBASIC17.37■□□□□ 0.37
USH1GQ495M9 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USH1GQ495M9 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.37■□□□□ 0.37
USH1GQ495M9 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
USH1GQ495M9 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USH1GQ495M9 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.37■□□□□ 0.37
USH1GQ495M9 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
USH1GQ495M9 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.36■□□□□ 0.37
USH1GQ495M9 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USH1GQ495M9 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USH1GQ495M9 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USH1GQ495M9 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USH1GQ495M9 AL023775.1-201ENST00000454907 1746 ntBASIC17.36■□□□□ 0.37
USH1GQ495M9 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USH1GQ495M9 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms