Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC6LQ2NKX8 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.15■□□□□ 0.18
ERCC6LQ2NKX8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.15■□□□□ 0.18
ERCC6LQ2NKX8 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ERCC6LQ2NKX8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.15■□□□□ 0.18
ERCC6LQ2NKX8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC6LQ2NKX8 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
ERCC6LQ2NKX8 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
ERCC6LQ2NKX8 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.15■□□□□ 0.18
ERCC6LQ2NKX8 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC16.15■□□□□ 0.18
ERCC6LQ2NKX8 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC6LQ2NKX8 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC6LQ2NKX8 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
ERCC6LQ2NKX8 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC6LQ2NKX8 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.15■□□□□ 0.18
ERCC6LQ2NKX8 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.15■□□□□ 0.18
ERCC6LQ2NKX8 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC6LQ2NKX8 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
ERCC6LQ2NKX8 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ERCC6LQ2NKX8 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC6LQ2NKX8 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC6LQ2NKX8 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC6LQ2NKX8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.15■□□□□ 0.18
ERCC6LQ2NKX8 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 BEND3P3-201ENST00000611030 2440 ntBASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC6LQ2NKX8 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 FUK-202ENST00000378912 3925 ntTSL 2 BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
ERCC6LQ2NKX8 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms