Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 AC092384.3-202ENST00000564646 2873 ntBASIC17.99■□□□□ 0.47
PDS5AQ29RF7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.99■□□□□ 0.47
PDS5AQ29RF7 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 RNMTL1P1-201ENST00000454103 560 ntBASIC17.98■□□□□ 0.47
PDS5AQ29RF7 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 MIR3619-201ENST00000579667 83 ntBASIC17.98■□□□□ 0.47
PDS5AQ29RF7 RN7SL163P-201ENST00000583100 276 ntBASIC17.98■□□□□ 0.47
PDS5AQ29RF7 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 AC244394.1-201ENST00000435000 1665 ntBASIC17.98■□□□□ 0.47
PDS5AQ29RF7 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 LINC01101-201ENST00000622953 1884 ntBASIC17.98■□□□□ 0.47
PDS5AQ29RF7 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 AC006486.2-201ENST00000624246 2199 ntBASIC17.98■□□□□ 0.47
PDS5AQ29RF7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 VDAC1P1-201ENST00000439229 848 ntBASIC17.98■□□□□ 0.47
PDS5AQ29RF7 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 AL035414.1-201ENST00000451327 857 ntBASIC17.98■□□□□ 0.47
PDS5AQ29RF7 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 EIF4HP1-201ENST00000453115 687 ntBASIC17.98■□□□□ 0.47
PDS5AQ29RF7 CICP12-201ENST00000455801 843 ntBASIC17.98■□□□□ 0.47
PDS5AQ29RF7 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 AC100757.4-201ENST00000626934 759 ntBASIC17.98■□□□□ 0.47
PDS5AQ29RF7 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.98■□□□□ 0.47
PDS5AQ29RF7 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 AC104640.1-201ENST00000562617 2109 ntBASIC17.97■□□□□ 0.47
PDS5AQ29RF7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 TUBBP5-203ENST00000508529 1334 ntBASIC17.97■□□□□ 0.47
PDS5AQ29RF7 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDS5AQ29RF7 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms