Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH1Q08174 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH1Q08174 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH1Q08174 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDH1Q08174 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDH1Q08174 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH1Q08174 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH1Q08174 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH1Q08174 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
PCDH1Q08174 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDH1Q08174 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH1Q08174 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH1Q08174 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDH1Q08174 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH1Q08174 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PCDH1Q08174 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDH1Q08174 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH1Q08174 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH1Q08174 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH1Q08174 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDH1Q08174 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDH1Q08174 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH1Q08174 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH1Q08174 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PCDH1Q08174 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH1Q08174 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
PCDH1Q08174 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH1Q08174 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH1Q08174 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH1Q08174 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH1Q08174 C1QBPP1-201ENST00000400117 770 ntBASIC14.67□□□□□ -0.06
PCDH1Q08174 AC098850.1-201ENST00000419919 790 ntBASIC14.67□□□□□ -0.06
PCDH1Q08174 BCRP1-201ENST00000444246 691 ntBASIC14.67□□□□□ -0.06
PCDH1Q08174 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.67□□□□□ -0.06
PCDH1Q08174 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDH1Q08174 AC123567.1-201ENST00000548294 1261 ntBASIC14.67□□□□□ -0.06
PCDH1Q08174 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.67□□□□□ -0.06
PCDH1Q08174 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.67□□□□□ -0.06
PCDH1Q08174 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH1Q08174 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH1Q08174 AL359258.3-201ENST00000622910 2331 ntBASIC14.67□□□□□ -0.06
PCDH1Q08174 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH1Q08174 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDH1Q08174 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH1Q08174 CICP14-201ENST00000629111 2732 ntBASIC14.67□□□□□ -0.06
PCDH1Q08174 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH1Q08174 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH1Q08174 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH1Q08174 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.67□□□□□ -0.06
PCDH1Q08174 AL157414.3-201ENST00000624276 1954 ntBASIC14.67□□□□□ -0.06
PCDH1Q08174 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH1Q08174 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PCDH1Q08174 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDH1Q08174 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDH1Q08174 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDH1Q08174 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
PCDH1Q08174 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDH1Q08174 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
PCDH1Q08174 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
PCDH1Q08174 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 OR2I1P-210ENST00000642037 4691 ntBASIC14.66□□□□□ -0.06
PCDH1Q08174 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDH1Q08174 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PCDH1Q08174 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PCDH1Q08174 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDH1Q08174 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDH1Q08174 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDH1Q08174 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDH1Q08174 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.66□□□□□ -0.06
PCDH1Q08174 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
PCDH1Q08174 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.66□□□□□ -0.06
PCDH1Q08174 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
PCDH1Q08174 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDH1Q08174 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.66□□□□□ -0.06
PCDH1Q08174 SPDYE22P-201ENST00000582158 798 ntBASIC14.66□□□□□ -0.06
PCDH1Q08174 RN7SL204P-201ENST00000582831 262 ntBASIC14.66□□□□□ -0.06
PCDH1Q08174 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.66□□□□□ -0.06
PCDH1Q08174 CHCHD2P3-201ENST00000603038 451 ntBASIC14.66□□□□□ -0.06
PCDH1Q08174 AC008761.3-201ENST00000624803 892 ntBASIC14.66□□□□□ -0.06
PCDH1Q08174 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PCDH1Q08174 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms