Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK3Q00526 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK3Q00526 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDK3Q00526 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK3Q00526 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK3Q00526 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDK3Q00526 FAM86HP-204ENST00000513466 959 ntBASIC14.88□□□□□ -0.03
CDK3Q00526 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CDK3Q00526 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.88□□□□□ -0.03
CDK3Q00526 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.88□□□□□ -0.03
CDK3Q00526 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK3Q00526 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.88□□□□□ -0.03
CDK3Q00526 RN7SL219P-201ENST00000582872 296 ntBASIC14.88□□□□□ -0.03
CDK3Q00526 EEF1DP1-201ENST00000585891 896 ntBASIC14.88□□□□□ -0.03
CDK3Q00526 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.88□□□□□ -0.03
CDK3Q00526 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK3Q00526 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CDK3Q00526 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK3Q00526 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK3Q00526 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDK3Q00526 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK3Q00526 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDK3Q00526 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK3Q00526 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK3Q00526 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDK3Q00526 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
CDK3Q00526 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.87□□□□□ -0.03
CDK3Q00526 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.87□□□□□ -0.03
CDK3Q00526 AC092384.3-202ENST00000564646 2873 ntBASIC14.87□□□□□ -0.03
CDK3Q00526 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK3Q00526 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.87□□□□□ -0.03
CDK3Q00526 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CDK3Q00526 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDK3Q00526 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDK3Q00526 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK3Q00526 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDK3Q00526 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK3Q00526 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDK3Q00526 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK3Q00526 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CDK3Q00526 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.87□□□□□ -0.03
CDK3Q00526 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDK3Q00526 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.87□□□□□ -0.03
CDK3Q00526 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK3Q00526 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDK3Q00526 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDK3Q00526 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
CDK3Q00526 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK3Q00526 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDK3Q00526 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.87□□□□□ -0.03
CDK3Q00526 Z93015.1-201ENST00000451718 390 ntBASIC14.87□□□□□ -0.03
CDK3Q00526 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.87□□□□□ -0.03
CDK3Q00526 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.87□□□□□ -0.03
CDK3Q00526 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CDK3Q00526 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.87□□□□□ -0.03
CDK3Q00526 PPY2P-201ENST00000582808 702 ntBASIC14.87□□□□□ -0.03
CDK3Q00526 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK3Q00526 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.87□□□□□ -0.03
CDK3Q00526 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK3Q00526 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.87□□□□□ -0.03
CDK3Q00526 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.87□□□□□ -0.03
CDK3Q00526 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK3Q00526 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.87□□□□□ -0.03
CDK3Q00526 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDK3Q00526 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDK3Q00526 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDK3Q00526 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.87□□□□□ -0.03
CDK3Q00526 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK3Q00526 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.87□□□□□ -0.03
CDK3Q00526 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK3Q00526 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK3Q00526 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK3Q00526 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.87□□□□□ -0.03
CDK3Q00526 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CDK3Q00526 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CDK3Q00526 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.87□□□□□ -0.03
CDK3Q00526 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CDK3Q00526 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CDK3Q00526 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDK3Q00526 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK3Q00526 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.86□□□□□ -0.03
CDK3Q00526 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDK3Q00526 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.86□□□□□ -0.03
CDK3Q00526 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDK3Q00526 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDK3Q00526 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDK3Q00526 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.86□□□□□ -0.03
CDK3Q00526 AC023090.2-201ENST00000625182 2110 ntBASIC14.86□□□□□ -0.03
CDK3Q00526 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CDK3Q00526 AP000593.2-201ENST00000542775 1433 ntBASIC14.86□□□□□ -0.03
CDK3Q00526 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDK3Q00526 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDK3Q00526 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.86□□□□□ -0.03
CDK3Q00526 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.86□□□□□ -0.03
CDK3Q00526 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.86□□□□□ -0.03
CDK3Q00526 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDK3Q00526 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDK3Q00526 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDK3Q00526 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDK3Q00526 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms