Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.1□□□□□ -0.31
AP3S2P59780 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
AP3S2P59780 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.1□□□□□ -0.31
AP3S2P59780 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
AP3S2P59780 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.1□□□□□ -0.31
AP3S2P59780 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.1□□□□□ -0.31
AP3S2P59780 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
AP3S2P59780 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.1□□□□□ -0.31
AP3S2P59780 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.1□□□□□ -0.31
AP3S2P59780 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.1□□□□□ -0.31
AP3S2P59780 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.1□□□□□ -0.31
AP3S2P59780 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.1□□□□□ -0.31
AP3S2P59780 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.1□□□□□ -0.31
AP3S2P59780 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.1□□□□□ -0.31
AP3S2P59780 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.1□□□□□ -0.31
AP3S2P59780 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
AP3S2P59780 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
AP3S2P59780 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.1□□□□□ -0.31
AP3S2P59780 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 AC073389.1-201ENST00000595595 795 ntBASIC13.1□□□□□ -0.31
AP3S2P59780 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 AC026979.3-201ENST00000607315 403 ntBASIC13.1□□□□□ -0.31
AP3S2P59780 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 COL6A4P2-202ENST00000504443 2753 ntBASIC13.1□□□□□ -0.31
AP3S2P59780 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
AP3S2P59780 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
AP3S2P59780 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
AP3S2P59780 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.1□□□□□ -0.31
AP3S2P59780 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.1□□□□□ -0.31
AP3S2P59780 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.1□□□□□ -0.31
AP3S2P59780 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.1□□□□□ -0.31
AP3S2P59780 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.1□□□□□ -0.31
AP3S2P59780 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP3S2P59780 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S2P59780 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
AP3S2P59780 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.09□□□□□ -0.31
AP3S2P59780 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S2P59780 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
AP3S2P59780 AC105206.1-202ENST00000314927 2368 ntBASIC13.09□□□□□ -0.31
AP3S2P59780 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S2P59780 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S2P59780 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.09□□□□□ -0.31
AP3S2P59780 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S2P59780 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S2P59780 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S2P59780 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S2P59780 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S2P59780 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S2P59780 AC016397.2-201ENST00000624848 1985 ntBASIC13.09□□□□□ -0.31
AP3S2P59780 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S2P59780 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S2P59780 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.09□□□□□ -0.31
AP3S2P59780 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S2P59780 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S2P59780 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S2P59780 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S2P59780 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S2P59780 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S2P59780 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S2P59780 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S2P59780 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.09□□□□□ -0.31
AP3S2P59780 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.09□□□□□ -0.31
AP3S2P59780 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
AP3S2P59780 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.09□□□□□ -0.31
AP3S2P59780 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.09□□□□□ -0.31
AP3S2P59780 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
AP3S2P59780 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.09□□□□□ -0.31
AP3S2P59780 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S2P59780 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.09□□□□□ -0.31
AP3S2P59780 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.09□□□□□ -0.31
AP3S2P59780 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
AP3S2P59780 MIR4751-201ENST00000578027 74 ntBASIC13.09□□□□□ -0.31
AP3S2P59780 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.09□□□□□ -0.31
AP3S2P59780 AC008735.5-201ENST00000623544 497 ntBASIC13.09□□□□□ -0.31
AP3S2P59780 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.09□□□□□ -0.31
AP3S2P59780 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
AP3S2P59780 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S2P59780 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
AP3S2P59780 REXO1L4P-201ENST00000605109 1937 ntBASIC13.09□□□□□ -0.31
AP3S2P59780 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S2P59780 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S2P59780 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.09□□□□□ -0.31
AP3S2P59780 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
AP3S2P59780 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.09□□□□□ -0.31
AP3S2P59780 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms