Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH8P55286 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH8P55286 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH8P55286 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CDH8P55286 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH8P55286 C2orf27AP3-201ENST00000434123 579 ntBASIC16.18■□□□□ 0.18
CDH8P55286 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH8P55286 FO681548.1-201ENST00000455617 1132 ntBASIC16.18■□□□□ 0.18
CDH8P55286 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
CDH8P55286 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.18■□□□□ 0.18
CDH8P55286 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH8P55286 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH8P55286 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.18■□□□□ 0.18
CDH8P55286 MIR4259-201ENST00000584466 101 ntBASIC16.18■□□□□ 0.18
CDH8P55286 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CDH8P55286 AL359881.2-201ENST00000602973 570 ntBASIC16.18■□□□□ 0.18
CDH8P55286 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
CDH8P55286 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CDH8P55286 AL354718.3-201ENST00000616414 581 ntBASIC16.18■□□□□ 0.18
CDH8P55286 CR382287.1-201ENST00000623954 586 ntBASIC16.18■□□□□ 0.18
CDH8P55286 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH8P55286 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH8P55286 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH8P55286 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH8P55286 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH8P55286 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH8P55286 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH8P55286 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CDH8P55286 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH8P55286 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH8P55286 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH8P55286 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH8P55286 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH8P55286 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CDH8P55286 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH8P55286 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
CDH8P55286 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.17■□□□□ 0.18
CDH8P55286 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH8P55286 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH8P55286 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH8P55286 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
CDH8P55286 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH8P55286 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH8P55286 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH8P55286 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH8P55286 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH8P55286 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH8P55286 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH8P55286 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH8P55286 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH8P55286 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CDH8P55286 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.17■□□□□ 0.18
CDH8P55286 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH8P55286 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
CDH8P55286 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.17■□□□□ 0.18
CDH8P55286 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.17■□□□□ 0.18
CDH8P55286 AC234783.1-201ENST00000441761 496 ntBASIC16.17■□□□□ 0.18
CDH8P55286 CTBP2P5-201ENST00000454986 1264 ntBASIC16.17■□□□□ 0.18
CDH8P55286 AC119751.2-201ENST00000504529 210 ntBASIC16.17■□□□□ 0.18
CDH8P55286 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH8P55286 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.17■□□□□ 0.18
CDH8P55286 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH8P55286 AC078819.1-201ENST00000547454 765 ntBASIC16.17■□□□□ 0.18
CDH8P55286 AC012085.1-201ENST00000548270 765 ntBASIC16.17■□□□□ 0.18
CDH8P55286 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.17■□□□□ 0.18
CDH8P55286 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.17■□□□□ 0.18
CDH8P55286 ECM1P1-201ENST00000604092 1279 ntBASIC16.17■□□□□ 0.18
CDH8P55286 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.17■□□□□ 0.18
CDH8P55286 AC132938.4-201ENST00000623835 848 ntBASIC16.17■□□□□ 0.18
CDH8P55286 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH8P55286 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CDH8P55286 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH8P55286 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH8P55286 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH8P55286 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
CDH8P55286 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.17■□□□□ 0.18
CDH8P55286 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
CDH8P55286 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH8P55286 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH8P55286 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH8P55286 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH8P55286 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH8P55286 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH8P55286 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CDH8P55286 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH8P55286 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH8P55286 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CDH8P55286 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
CDH8P55286 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH8P55286 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.16■□□□□ 0.18
CDH8P55286 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CDH8P55286 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH8P55286 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH8P55286 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CDH8P55286 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH8P55286 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH8P55286 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH8P55286 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH8P55286 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH8P55286 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms