Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.84■□□□□ 0.13
CDH6P55285 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH6P55285 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH6P55285 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH6P55285 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH6P55285 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CDH6P55285 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH6P55285 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH6P55285 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH6P55285 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH6P55285 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH6P55285 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH6P55285 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CDH6P55285 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CDH6P55285 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH6P55285 INTS4P1-203ENST00000641008 3683 ntBASIC15.84■□□□□ 0.13
CDH6P55285 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH6P55285 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CDH6P55285 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH6P55285 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH6P55285 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH6P55285 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH6P55285 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
CDH6P55285 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH6P55285 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH6P55285 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH6P55285 AC018529.2-202ENST00000611482 3087 ntBASIC15.83■□□□□ 0.13
CDH6P55285 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.83■□□□□ 0.13
CDH6P55285 AC232323.1-201ENST00000540724 2099 ntBASIC15.83■□□□□ 0.13
CDH6P55285 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.83■□□□□ 0.13
CDH6P55285 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.83■□□□□ 0.13
CDH6P55285 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH6P55285 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH6P55285 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.83■□□□□ 0.13
CDH6P55285 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH6P55285 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH6P55285 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CDH6P55285 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH6P55285 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH6P55285 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
CDH6P55285 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH6P55285 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH6P55285 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CDH6P55285 AC007292.2-201ENST00000593524 1812 ntBASIC15.83■□□□□ 0.12
CDH6P55285 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH6P55285 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH6P55285 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
CDH6P55285 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH6P55285 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH6P55285 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH6P55285 C1QBPP1-201ENST00000400117 770 ntBASIC15.83■□□□□ 0.12
CDH6P55285 AC087499.6-201ENST00000411576 835 ntBASIC15.83■□□□□ 0.12
CDH6P55285 AC098850.1-201ENST00000419919 790 ntBASIC15.83■□□□□ 0.12
CDH6P55285 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH6P55285 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH6P55285 HLA-K-203ENST00000430151 1046 ntBASIC15.83■□□□□ 0.12
CDH6P55285 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH6P55285 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH6P55285 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.83■□□□□ 0.12
CDH6P55285 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.83■□□□□ 0.12
CDH6P55285 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH6P55285 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH6P55285 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH6P55285 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CDH6P55285 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH6P55285 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH6P55285 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH6P55285 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CDH6P55285 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH6P55285 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CDH6P55285 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH6P55285 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH6P55285 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CDH6P55285 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH6P55285 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH6P55285 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.82■□□□□ 0.12
CDH6P55285 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH6P55285 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH6P55285 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH6P55285 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH6P55285 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH6P55285 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
CDH6P55285 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
CDH6P55285 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CDH6P55285 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH6P55285 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH6P55285 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH6P55285 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH6P55285 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH6P55285 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH6P55285 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH6P55285 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH6P55285 AL645937.2-201ENST00000396808 931 ntBASIC15.82■□□□□ 0.12
CDH6P55285 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.82■□□□□ 0.12
CDH6P55285 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.82■□□□□ 0.12
CDH6P55285 AL442647.2-201ENST00000429864 857 ntBASIC15.82■□□□□ 0.12
CDH6P55285 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.82■□□□□ 0.12
CDH6P55285 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.82■□□□□ 0.12
CDH6P55285 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.82■□□□□ 0.12
CDH6P55285 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms