Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRPF1P55201 AC018665.1-201ENST00000622927 1362 ntBASIC19.29■□□□□ 0.68
BRPF1P55201 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BRPF1P55201 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
BRPF1P55201 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BRPF1P55201 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC19.28■□□□□ 0.68
BRPF1P55201 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRPF1P55201 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRPF1P55201 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
BRPF1P55201 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRPF1P55201 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRPF1P55201 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
BRPF1P55201 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC19.28■□□□□ 0.68
BRPF1P55201 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRPF1P55201 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BRPF1P55201 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BRPF1P55201 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BRPF1P55201 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRPF1P55201 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRPF1P55201 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRPF1P55201 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC19.28■□□□□ 0.68
BRPF1P55201 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.28■□□□□ 0.68
BRPF1P55201 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BRPF1P55201 AC106760.1-201ENST00000508690 800 ntBASIC19.28■□□□□ 0.68
BRPF1P55201 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRPF1P55201 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC19.28■□□□□ 0.68
BRPF1P55201 COG4-212ENST00000564653 590 ntTSL 5 BASIC19.28■□□□□ 0.68
BRPF1P55201 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC19.28■□□□□ 0.68
BRPF1P55201 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC19.28■□□□□ 0.68
BRPF1P55201 AC025279.2-201ENST00000569730 653 ntBASIC19.28■□□□□ 0.68
BRPF1P55201 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC19.28■□□□□ 0.68
BRPF1P55201 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BRPF1P55201 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC19.28■□□□□ 0.68
BRPF1P55201 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC19.28■□□□□ 0.68
BRPF1P55201 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
BRPF1P55201 LRRC59-203ENST00000576448 1531 ntBASIC19.28■□□□□ 0.68
BRPF1P55201 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BRPF1P55201 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BRPF1P55201 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRPF1P55201 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRPF1P55201 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC19.28■□□□□ 0.68
BRPF1P55201 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRPF1P55201 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
BRPF1P55201 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
BRPF1P55201 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BRPF1P55201 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.28■□□□□ 0.68
BRPF1P55201 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC19.28■□□□□ 0.68
BRPF1P55201 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRPF1P55201 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRPF1P55201 ANKRD26P3-201ENST00000454044 2748 ntBASIC19.27■□□□□ 0.68
BRPF1P55201 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC19.27■□□□□ 0.68
BRPF1P55201 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC19.27■□□□□ 0.68
BRPF1P55201 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC19.27■□□□□ 0.68
BRPF1P55201 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
BRPF1P55201 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRPF1P55201 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC19.27■□□□□ 0.68
BRPF1P55201 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRPF1P55201 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BRPF1P55201 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BRPF1P55201 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRPF1P55201 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC19.27■□□□□ 0.68
BRPF1P55201 RNA5SP412-201ENST00000516234 123 ntBASIC19.27■□□□□ 0.68
BRPF1P55201 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
BRPF1P55201 AC233724.13-201ENST00000598383 410 ntBASIC19.27■□□□□ 0.68
BRPF1P55201 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC19.27■□□□□ 0.68
BRPF1P55201 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC19.27■□□□□ 0.68
BRPF1P55201 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRPF1P55201 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRPF1P55201 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC19.27■□□□□ 0.68
BRPF1P55201 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
BRPF1P55201 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC19.27■□□□□ 0.67
BRPF1P55201 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
BRPF1P55201 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC19.27■□□□□ 0.67
BRPF1P55201 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
BRPF1P55201 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.67
BRPF1P55201 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRPF1P55201 AL138725.1-201ENST00000407347 1314 ntBASIC19.26■□□□□ 0.67
BRPF1P55201 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRPF1P55201 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRPF1P55201 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRPF1P55201 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRPF1P55201 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC19.26■□□□□ 0.67
BRPF1P55201 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRPF1P55201 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BRPF1P55201 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
BRPF1P55201 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRPF1P55201 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRPF1P55201 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
BRPF1P55201 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRPF1P55201 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BRPF1P55201 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BRPF1P55201 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
BRPF1P55201 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC19.26■□□□□ 0.67
BRPF1P55201 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC19.26■□□□□ 0.67
BRPF1P55201 RNA5SP423-201ENST00000517127 109 ntBASIC19.26■□□□□ 0.67
BRPF1P55201 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
BRPF1P55201 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC19.26■□□□□ 0.67
BRPF1P55201 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC19.26■□□□□ 0.67
BRPF1P55201 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.26■□□□□ 0.67
BRPF1P55201 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms