Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
CPT1AP50416 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPT1AP50416 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPT1AP50416 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPT1AP50416 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CPT1AP50416 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CPT1AP50416 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPT1AP50416 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPT1AP50416 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPT1AP50416 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPT1AP50416 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CPT1AP50416 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.65■□□□□ 0.26
CPT1AP50416 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPT1AP50416 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.65■□□□□ 0.26
CPT1AP50416 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.65■□□□□ 0.26
CPT1AP50416 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPT1AP50416 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPT1AP50416 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPT1AP50416 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CPT1AP50416 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPT1AP50416 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
CPT1AP50416 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.65■□□□□ 0.26
CPT1AP50416 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPT1AP50416 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CPT1AP50416 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPT1AP50416 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPT1AP50416 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPT1AP50416 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CPT1AP50416 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPT1AP50416 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPT1AP50416 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.65■□□□□ 0.26
CPT1AP50416 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.65■□□□□ 0.26
CPT1AP50416 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.65■□□□□ 0.26
CPT1AP50416 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.65■□□□□ 0.26
CPT1AP50416 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.65■□□□□ 0.26
CPT1AP50416 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.65■□□□□ 0.26
CPT1AP50416 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.65■□□□□ 0.26
CPT1AP50416 ALG3P1-201ENST00000508806 1114 ntBASIC16.65■□□□□ 0.26
CPT1AP50416 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPT1AP50416 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPT1AP50416 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
CPT1AP50416 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CPT1AP50416 SPCS2P2-201ENST00000603270 608 ntBASIC16.65■□□□□ 0.26
CPT1AP50416 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
CPT1AP50416 AF254983.2-201ENST00000612331 135 ntBASIC16.65■□□□□ 0.26
CPT1AP50416 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.65■□□□□ 0.26
CPT1AP50416 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.65■□□□□ 0.26
CPT1AP50416 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.65■□□□□ 0.26
CPT1AP50416 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPT1AP50416 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPT1AP50416 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPT1AP50416 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CPT1AP50416 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CPT1AP50416 AC003102.2-201ENST00000589195 1469 ntBASIC16.65■□□□□ 0.26
CPT1AP50416 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.65■□□□□ 0.26
CPT1AP50416 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPT1AP50416 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.65■□□□□ 0.26
CPT1AP50416 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPT1AP50416 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CPT1AP50416 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPT1AP50416 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CPT1AP50416 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPT1AP50416 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CPT1AP50416 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.65■□□□□ 0.26
CPT1AP50416 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.65■□□□□ 0.26
CPT1AP50416 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CPT1AP50416 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.64■□□□□ 0.26
CPT1AP50416 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.64■□□□□ 0.25
CPT1AP50416 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CPT1AP50416 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.64■□□□□ 0.25
CPT1AP50416 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPT1AP50416 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.64■□□□□ 0.25
CPT1AP50416 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPT1AP50416 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
CPT1AP50416 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.64■□□□□ 0.25
CPT1AP50416 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPT1AP50416 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPT1AP50416 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPT1AP50416 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPT1AP50416 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.64■□□□□ 0.25
CPT1AP50416 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPT1AP50416 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPT1AP50416 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPT1AP50416 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CPT1AP50416 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPT1AP50416 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.64■□□□□ 0.25
CPT1AP50416 KLF2P1-201ENST00000447438 1042 ntBASIC16.64■□□□□ 0.25
CPT1AP50416 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.64■□□□□ 0.25
CPT1AP50416 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPT1AP50416 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.64■□□□□ 0.25
CPT1AP50416 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPT1AP50416 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPT1AP50416 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPT1AP50416 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPT1AP50416 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.64■□□□□ 0.25
CPT1AP50416 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPT1AP50416 MBLAC2-202ENST00000514906 1936 ntBASIC16.64■□□□□ 0.25
CPT1AP50416 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPT1AP50416 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.64■□□□□ 0.25
CPT1AP50416 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms