Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOBEC1P41238 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
APOBEC1P41238 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.74□□□□□ -0.21
APOBEC1P41238 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOBEC1P41238 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOBEC1P41238 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
APOBEC1P41238 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOBEC1P41238 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.74□□□□□ -0.21
APOBEC1P41238 KRT8P35-201ENST00000483942 1338 ntBASIC13.74□□□□□ -0.21
APOBEC1P41238 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOBEC1P41238 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
APOBEC1P41238 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.74□□□□□ -0.21
APOBEC1P41238 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
APOBEC1P41238 BAATP1-201ENST00000412284 1225 ntBASIC13.74□□□□□ -0.21
APOBEC1P41238 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.74□□□□□ -0.21
APOBEC1P41238 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.74□□□□□ -0.21
APOBEC1P41238 RN7SL692P-201ENST00000464677 288 ntBASIC13.74□□□□□ -0.21
APOBEC1P41238 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOBEC1P41238 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.74□□□□□ -0.21
APOBEC1P41238 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
APOBEC1P41238 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOBEC1P41238 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOBEC1P41238 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.74□□□□□ -0.21
APOBEC1P41238 AC010319.3-201ENST00000597028 470 ntBASIC13.74□□□□□ -0.21
APOBEC1P41238 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOBEC1P41238 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.74□□□□□ -0.21
APOBEC1P41238 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.74□□□□□ -0.21
APOBEC1P41238 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOBEC1P41238 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
APOBEC1P41238 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.74□□□□□ -0.21
APOBEC1P41238 FGD5P1-202ENST00000614866 2498 ntBASIC13.74□□□□□ -0.21
APOBEC1P41238 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOBEC1P41238 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOBEC1P41238 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOBEC1P41238 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
APOBEC1P41238 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.74□□□□□ -0.21
APOBEC1P41238 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
APOBEC1P41238 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOBEC1P41238 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOBEC1P41238 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOBEC1P41238 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOBEC1P41238 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOBEC1P41238 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOBEC1P41238 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOBEC1P41238 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOBEC1P41238 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOBEC1P41238 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
APOBEC1P41238 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.73□□□□□ -0.21
APOBEC1P41238 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOBEC1P41238 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.73□□□□□ -0.21
APOBEC1P41238 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
APOBEC1P41238 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
APOBEC1P41238 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOBEC1P41238 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.73□□□□□ -0.21
APOBEC1P41238 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
APOBEC1P41238 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.73□□□□□ -0.21
APOBEC1P41238 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
APOBEC1P41238 AP002414.2-201ENST00000591780 3365 ntBASIC13.73□□□□□ -0.21
APOBEC1P41238 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
APOBEC1P41238 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOBEC1P41238 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOBEC1P41238 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOBEC1P41238 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOBEC1P41238 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.73□□□□□ -0.21
APOBEC1P41238 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
APOBEC1P41238 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.73□□□□□ -0.21
APOBEC1P41238 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
APOBEC1P41238 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.73□□□□□ -0.21
APOBEC1P41238 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.73□□□□□ -0.21
APOBEC1P41238 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.73□□□□□ -0.21
APOBEC1P41238 AC007389.4-201ENST00000454674 793 ntBASIC13.73□□□□□ -0.21
APOBEC1P41238 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.73□□□□□ -0.21
APOBEC1P41238 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOBEC1P41238 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.73□□□□□ -0.21
APOBEC1P41238 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.73□□□□□ -0.21
APOBEC1P41238 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.73□□□□□ -0.21
APOBEC1P41238 TDH-203ENST00000531764 1110 ntBASIC13.73□□□□□ -0.21
APOBEC1P41238 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.73□□□□□ -0.21
APOBEC1P41238 AL596325.1-201ENST00000563991 1082 ntBASIC13.73□□□□□ -0.21
APOBEC1P41238 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOBEC1P41238 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.73□□□□□ -0.21
APOBEC1P41238 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.73□□□□□ -0.21
APOBEC1P41238 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOBEC1P41238 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
APOBEC1P41238 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
APOBEC1P41238 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOBEC1P41238 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOBEC1P41238 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.73□□□□□ -0.21
APOBEC1P41238 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOBEC1P41238 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
APOBEC1P41238 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOBEC1P41238 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.73□□□□□ -0.21
APOBEC1P41238 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOBEC1P41238 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
APOBEC1P41238 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.73□□□□□ -0.21
APOBEC1P41238 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.73□□□□□ -0.21
APOBEC1P41238 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOBEC1P41238 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOBEC1P41238 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOBEC1P41238 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms