Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HADHAP40939 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HADHAP40939 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
HADHAP40939 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HADHAP40939 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HADHAP40939 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
HADHAP40939 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
HADHAP40939 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.42■□□□□ 0.06
HADHAP40939 AC002472.2-201ENST00000442739 958 ntBASIC15.42■□□□□ 0.06
HADHAP40939 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HADHAP40939 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.42■□□□□ 0.06
HADHAP40939 GAPDHP40-201ENST00000505218 1006 ntBASIC15.42■□□□□ 0.06
HADHAP40939 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.42■□□□□ 0.06
HADHAP40939 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.42■□□□□ 0.06
HADHAP40939 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.42■□□□□ 0.06
HADHAP40939 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.42■□□□□ 0.06
HADHAP40939 RN7SL204P-201ENST00000582831 262 ntBASIC15.42■□□□□ 0.06
HADHAP40939 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.42■□□□□ 0.06
HADHAP40939 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HADHAP40939 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.42■□□□□ 0.06
HADHAP40939 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HADHAP40939 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HADHAP40939 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HADHAP40939 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HADHAP40939 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HADHAP40939 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
HADHAP40939 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.42■□□□□ 0.06
HADHAP40939 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HADHAP40939 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HADHAP40939 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HADHAP40939 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HADHAP40939 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
HADHAP40939 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HADHAP40939 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
HADHAP40939 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HADHAP40939 DRD5P1-201ENST00000456605 1438 ntBASIC15.42■□□□□ 0.06
HADHAP40939 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HADHAP40939 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
HADHAP40939 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HADHAP40939 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HADHAP40939 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HADHAP40939 AP000845.1-201ENST00000581677 2131 ntBASIC15.41■□□□□ 0.06
HADHAP40939 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HADHAP40939 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HADHAP40939 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HADHAP40939 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HADHAP40939 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HADHAP40939 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HADHAP40939 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HADHAP40939 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HADHAP40939 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HADHAP40939 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HADHAP40939 AC007191.1-201ENST00000623179 2995 ntBASIC15.41■□□□□ 0.06
HADHAP40939 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.41■□□□□ 0.06
HADHAP40939 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
HADHAP40939 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HADHAP40939 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HADHAP40939 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HADHAP40939 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.41■□□□□ 0.06
HADHAP40939 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.41■□□□□ 0.06
HADHAP40939 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.41■□□□□ 0.06
HADHAP40939 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HADHAP40939 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.41■□□□□ 0.06
HADHAP40939 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.41■□□□□ 0.06
HADHAP40939 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.41■□□□□ 0.06
HADHAP40939 AC026410.3-201ENST00000514280 936 ntBASIC15.41■□□□□ 0.06
HADHAP40939 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.41■□□□□ 0.06
HADHAP40939 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.41■□□□□ 0.06
HADHAP40939 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.41■□□□□ 0.06
HADHAP40939 BRI3BPP1-201ENST00000594224 787 ntBASIC15.41■□□□□ 0.06
HADHAP40939 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.41■□□□□ 0.06
HADHAP40939 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
HADHAP40939 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HADHAP40939 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HADHAP40939 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HADHAP40939 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HADHAP40939 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.41■□□□□ 0.06
HADHAP40939 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HADHAP40939 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HADHAP40939 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.41■□□□□ 0.06
HADHAP40939 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
HADHAP40939 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HADHAP40939 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HADHAP40939 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.4■□□□□ 0.06
HADHAP40939 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HADHAP40939 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HADHAP40939 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HADHAP40939 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HADHAP40939 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
HADHAP40939 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.4■□□□□ 0.06
HADHAP40939 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
HADHAP40939 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
HADHAP40939 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HADHAP40939 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.4■□□□□ 0.06
HADHAP40939 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HADHAP40939 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.4■□□□□ 0.06
HADHAP40939 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HADHAP40939 AC236430.1-201ENST00000402231 743 ntBASIC15.4■□□□□ 0.06
HADHAP40939 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.4■□□□□ 0.06
HADHAP40939 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms