Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFC4P35249 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFC4P35249 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.83■□□□□ 0.61
RFC4P35249 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
RFC4P35249 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFC4P35249 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
RFC4P35249 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFC4P35249 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RFC4P35249 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFC4P35249 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFC4P35249 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC18.83■□□□□ 0.6
RFC4P35249 BUD31-205ENST00000456893 512 ntTSL 5 BASIC18.83■□□□□ 0.6
RFC4P35249 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.83■□□□□ 0.6
RFC4P35249 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC18.83■□□□□ 0.6
RFC4P35249 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC18.83■□□□□ 0.6
RFC4P35249 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC18.83■□□□□ 0.6
RFC4P35249 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC18.83■□□□□ 0.6
RFC4P35249 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC18.83■□□□□ 0.6
RFC4P35249 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
RFC4P35249 AC005632.3-201ENST00000605544 308 ntBASIC18.83■□□□□ 0.6
RFC4P35249 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC18.83■□□□□ 0.6
RFC4P35249 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFC4P35249 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
RFC4P35249 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC18.83■□□□□ 0.6
RFC4P35249 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFC4P35249 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RFC4P35249 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RFC4P35249 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RFC4P35249 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFC4P35249 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFC4P35249 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFC4P35249 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFC4P35249 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFC4P35249 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RFC4P35249 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RFC4P35249 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC18.83■□□□□ 0.6
RFC4P35249 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RFC4P35249 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC4P35249 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC4P35249 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.82■□□□□ 0.6
RFC4P35249 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC4P35249 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC18.82■□□□□ 0.6
RFC4P35249 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC18.82■□□□□ 0.6
RFC4P35249 AL157407.1-201ENST00000435784 904 ntBASIC18.82■□□□□ 0.6
RFC4P35249 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.82■□□□□ 0.6
RFC4P35249 KRT18P66-201ENST00000452970 1269 ntBASIC18.82■□□□□ 0.6
RFC4P35249 CICP12-201ENST00000455801 843 ntBASIC18.82■□□□□ 0.6
RFC4P35249 AC130709.1-201ENST00000484779 1212 ntBASIC18.82■□□□□ 0.6
RFC4P35249 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
RFC4P35249 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC18.82■□□□□ 0.6
RFC4P35249 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC18.82■□□□□ 0.6
RFC4P35249 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC4P35249 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.82■□□□□ 0.6
RFC4P35249 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFC4P35249 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RFC4P35249 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RFC4P35249 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC4P35249 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC4P35249 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC4P35249 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.82■□□□□ 0.6
RFC4P35249 AC144522.1-201ENST00000625111 1658 ntBASIC18.82■□□□□ 0.6
RFC4P35249 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RFC4P35249 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC4P35249 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC4P35249 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFC4P35249 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC4P35249 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC4P35249 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.81■□□□□ 0.6
RFC4P35249 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.81■□□□□ 0.6
RFC4P35249 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFC4P35249 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RFC4P35249 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RFC4P35249 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC18.81■□□□□ 0.6
RFC4P35249 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFC4P35249 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC4P35249 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC4P35249 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RFC4P35249 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC4P35249 AC097065.1-201ENST00000425737 517 ntBASIC18.81■□□□□ 0.6
RFC4P35249 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC18.81■□□□□ 0.6
RFC4P35249 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC18.81■□□□□ 0.6
RFC4P35249 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC18.81■□□□□ 0.6
RFC4P35249 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFC4P35249 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC18.81■□□□□ 0.6
RFC4P35249 RBM8B-201ENST00000555532 525 ntBASIC18.81■□□□□ 0.6
RFC4P35249 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC18.81■□□□□ 0.6
RFC4P35249 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC18.81■□□□□ 0.6
RFC4P35249 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC18.81■□□□□ 0.6
RFC4P35249 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC18.81■□□□□ 0.6
RFC4P35249 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC4P35249 LINC02199-201ENST00000506655 2702 ntBASIC18.81■□□□□ 0.6
RFC4P35249 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.81■□□□□ 0.6
RFC4P35249 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC4P35249 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC4P35249 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC4P35249 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC4P35249 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC18.81■□□□□ 0.6
RFC4P35249 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC4P35249 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC4P35249 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms