Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC007292.2-201ENST00000593524 1812 ntBASIC18.49■□□□□ 0.55
TM4SF1P30408 FAS-202ENST00000352159 1722 ntTSL 5 BASIC18.49■□□□□ 0.55
TM4SF1P30408 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TM4SF1P30408 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC18.49■□□□□ 0.55
TM4SF1P30408 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TM4SF1P30408 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.48■□□□□ 0.55
TM4SF1P30408 AL365203.3-201ENST00000609742 2057 ntBASIC18.48■□□□□ 0.55
TM4SF1P30408 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TM4SF1P30408 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.48■□□□□ 0.55
TM4SF1P30408 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TM4SF1P30408 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TM4SF1P30408 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC18.48■□□□□ 0.55
TM4SF1P30408 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM4SF1P30408 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC18.48■□□□□ 0.55
TM4SF1P30408 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM4SF1P30408 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM4SF1P30408 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TM4SF1P30408 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC18.48■□□□□ 0.55
TM4SF1P30408 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC18.48■□□□□ 0.55
TM4SF1P30408 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC18.48■□□□□ 0.55
TM4SF1P30408 AP000911.2-201ENST00000534330 502 ntBASIC18.48■□□□□ 0.55
TM4SF1P30408 AC007326.1-201ENST00000604539 458 ntBASIC18.48■□□□□ 0.55
TM4SF1P30408 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.48■□□□□ 0.55
TM4SF1P30408 AC073911.3-201ENST00000624401 631 ntBASIC18.48■□□□□ 0.55
TM4SF1P30408 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC18.48■□□□□ 0.55
TM4SF1P30408 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
TM4SF1P30408 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TM4SF1P30408 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TM4SF1P30408 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM4SF1P30408 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.48■□□□□ 0.55
TM4SF1P30408 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TM4SF1P30408 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM4SF1P30408 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM4SF1P30408 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM4SF1P30408 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TM4SF1P30408 AC084018.2-201ENST00000613093 2607 ntBASIC18.48■□□□□ 0.55
TM4SF1P30408 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM4SF1P30408 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TM4SF1P30408 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TM4SF1P30408 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TM4SF1P30408 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.47■□□□□ 0.55
TM4SF1P30408 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.47■□□□□ 0.55
TM4SF1P30408 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TM4SF1P30408 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM4SF1P30408 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM4SF1P30408 RNA5SP359-201ENST00000364838 113 ntBASIC18.47■□□□□ 0.55
TM4SF1P30408 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM4SF1P30408 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC18.47■□□□□ 0.55
TM4SF1P30408 AL357563.1-201ENST00000404728 395 ntBASIC18.47■□□□□ 0.55
TM4SF1P30408 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM4SF1P30408 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TM4SF1P30408 POLD4-208ENST00000532830 904 ntTSL 3 BASIC18.47■□□□□ 0.55
TM4SF1P30408 AC003686.1-201ENST00000550956 1034 ntBASIC18.47■□□□□ 0.55
TM4SF1P30408 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC18.47■□□□□ 0.55
TM4SF1P30408 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC18.47■□□□□ 0.55
TM4SF1P30408 AC005041.3-201ENST00000606287 649 ntBASIC18.47■□□□□ 0.55
TM4SF1P30408 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC18.47■□□□□ 0.55
TM4SF1P30408 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC18.47■□□□□ 0.55
TM4SF1P30408 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC18.47■□□□□ 0.55
TM4SF1P30408 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TM4SF1P30408 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM4SF1P30408 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM4SF1P30408 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC18.47■□□□□ 0.55
TM4SF1P30408 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM4SF1P30408 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TM4SF1P30408 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM4SF1P30408 IL9RP3-201ENST00000442856 1674 ntBASIC18.47■□□□□ 0.55
TM4SF1P30408 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TM4SF1P30408 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TM4SF1P30408 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.47■□□□□ 0.55
TM4SF1P30408 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM4SF1P30408 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TM4SF1P30408 REXO1L2P-201ENST00000425429 2069 ntBASIC18.46■□□□□ 0.55
TM4SF1P30408 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
TM4SF1P30408 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC18.46■□□□□ 0.55
TM4SF1P30408 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM4SF1P30408 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM4SF1P30408 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TM4SF1P30408 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TM4SF1P30408 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.46■□□□□ 0.55
TM4SF1P30408 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TM4SF1P30408 AC090502.4-201ENST00000551714 1386 ntBASIC18.46■□□□□ 0.55
TM4SF1P30408 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
TM4SF1P30408 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.46■□□□□ 0.55
TM4SF1P30408 AC026691.1-201ENST00000602502 2017 ntBASIC18.46■□□□□ 0.55
TM4SF1P30408 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC18.46■□□□□ 0.55
TM4SF1P30408 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TM4SF1P30408 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TM4SF1P30408 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TM4SF1P30408 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC18.46■□□□□ 0.55
TM4SF1P30408 AC010234.1-201ENST00000494599 870 ntBASIC18.46■□□□□ 0.55
TM4SF1P30408 RHEB-207ENST00000496004 744 ntTSL 2 BASIC18.46■□□□□ 0.55
TM4SF1P30408 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC18.46■□□□□ 0.55
TM4SF1P30408 AP003398.1-201ENST00000531124 318 ntBASIC18.46■□□□□ 0.55
TM4SF1P30408 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TM4SF1P30408 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC18.46■□□□□ 0.55
TM4SF1P30408 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TM4SF1P30408 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC18.46■□□□□ 0.55
TM4SF1P30408 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TM4SF1P30408 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms