Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 AL158070.2-201ENST00000623713 1621 ntBASIC17.25■□□□□ 0.35
CNGA1P29973 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.25■□□□□ 0.35
CNGA1P29973 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.25■□□□□ 0.35
CNGA1P29973 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.25■□□□□ 0.35
CNGA1P29973 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CNGA1P29973 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CNGA1P29973 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.25■□□□□ 0.35
CNGA1P29973 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CNGA1P29973 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.25■□□□□ 0.35
CNGA1P29973 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CNGA1P29973 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CNGA1P29973 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.25■□□□□ 0.35
CNGA1P29973 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.25■□□□□ 0.35
CNGA1P29973 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.25■□□□□ 0.35
CNGA1P29973 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.25■□□□□ 0.35
CNGA1P29973 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CNGA1P29973 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 LDHBP1-201ENST00000455730 1119 ntBASIC17.25■□□□□ 0.35
CNGA1P29973 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 FTLP10-202ENST00000505798 471 ntBASIC17.25■□□□□ 0.35
CNGA1P29973 AC134698.3-201ENST00000523880 214 ntBASIC17.25■□□□□ 0.35
CNGA1P29973 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.25■□□□□ 0.35
CNGA1P29973 RN7SL774P-201ENST00000577467 290 ntBASIC17.25■□□□□ 0.35
CNGA1P29973 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC17.25■□□□□ 0.35
CNGA1P29973 MIR7845-201ENST00000618396 99 ntBASIC17.25■□□□□ 0.35
CNGA1P29973 AP001002.3-201ENST00000623482 206 ntBASIC17.25■□□□□ 0.35
CNGA1P29973 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.25■□□□□ 0.35
CNGA1P29973 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.25■□□□□ 0.35
CNGA1P29973 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CNGA1P29973 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.25■□□□□ 0.35
CNGA1P29973 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CNGA1P29973 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
CNGA1P29973 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CNGA1P29973 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.25■□□□□ 0.35
CNGA1P29973 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.25■□□□□ 0.35
CNGA1P29973 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CNGA1P29973 TUBBP5-203ENST00000508529 1334 ntBASIC17.24■□□□□ 0.35
CNGA1P29973 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.24■□□□□ 0.35
CNGA1P29973 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNGA1P29973 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CNGA1P29973 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CNGA1P29973 AC007787.1-201ENST00000588095 1583 ntBASIC17.24■□□□□ 0.35
CNGA1P29973 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CNGA1P29973 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.24■□□□□ 0.35
CNGA1P29973 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CNGA1P29973 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CNGA1P29973 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.24■□□□□ 0.35
CNGA1P29973 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNGA1P29973 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.24■□□□□ 0.35
CNGA1P29973 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNGA1P29973 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.24■□□□□ 0.35
CNGA1P29973 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.24■□□□□ 0.35
CNGA1P29973 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNGA1P29973 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CNGA1P29973 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CNGA1P29973 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNGA1P29973 AL391280.1-201ENST00000506969 1062 ntBASIC17.24■□□□□ 0.35
CNGA1P29973 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.24■□□□□ 0.35
CNGA1P29973 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.24■□□□□ 0.35
CNGA1P29973 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC17.24■□□□□ 0.35
CNGA1P29973 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC17.24■□□□□ 0.35
CNGA1P29973 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CNGA1P29973 AC073413.1-201ENST00000603927 732 ntBASIC17.24■□□□□ 0.35
CNGA1P29973 ZACNP1-201ENST00000612259 710 ntBASIC17.24■□□□□ 0.35
CNGA1P29973 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.24■□□□□ 0.35
CNGA1P29973 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC17.24■□□□□ 0.35
CNGA1P29973 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
CNGA1P29973 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CNGA1P29973 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.24■□□□□ 0.35
CNGA1P29973 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNGA1P29973 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNGA1P29973 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CNGA1P29973 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CNGA1P29973 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CNGA1P29973 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms