Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VAMP1P23763 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
VAMP1P23763 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
VAMP1P23763 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC12.93□□□□□ -0.34
VAMP1P23763 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VAMP1P23763 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.93□□□□□ -0.34
VAMP1P23763 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
VAMP1P23763 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VAMP1P23763 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VAMP1P23763 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VAMP1P23763 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
VAMP1P23763 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VAMP1P23763 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.93□□□□□ -0.34
VAMP1P23763 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
VAMP1P23763 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC12.93□□□□□ -0.34
VAMP1P23763 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VAMP1P23763 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.93□□□□□ -0.34
VAMP1P23763 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
VAMP1P23763 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.93□□□□□ -0.34
VAMP1P23763 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.93□□□□□ -0.34
VAMP1P23763 SLC4A1APP2-201ENST00000424054 1259 ntBASIC12.93□□□□□ -0.34
VAMP1P23763 RPS8P6-201ENST00000426177 609 ntBASIC12.93□□□□□ -0.34
VAMP1P23763 PRSS29P-201ENST00000440800 595 ntBASIC12.93□□□□□ -0.34
VAMP1P23763 SAPCD2P3-201ENST00000455031 850 ntBASIC12.93□□□□□ -0.34
VAMP1P23763 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC12.93□□□□□ -0.34
VAMP1P23763 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.93□□□□□ -0.34
VAMP1P23763 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.93□□□□□ -0.34
VAMP1P23763 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
VAMP1P23763 LINC01711-201ENST00000598340 967 ntBASIC12.93□□□□□ -0.34
VAMP1P23763 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.93□□□□□ -0.34
VAMP1P23763 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.93□□□□□ -0.34
VAMP1P23763 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
VAMP1P23763 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
VAMP1P23763 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
VAMP1P23763 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VAMP1P23763 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.93□□□□□ -0.34
VAMP1P23763 AC011474.4-201ENST00000623523 2076 ntBASIC12.93□□□□□ -0.34
VAMP1P23763 AL136982.4-201ENST00000437689 1740 ntBASIC12.93□□□□□ -0.34
VAMP1P23763 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VAMP1P23763 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VAMP1P23763 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VAMP1P23763 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VAMP1P23763 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VAMP1P23763 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.93□□□□□ -0.34
VAMP1P23763 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VAMP1P23763 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC12.93□□□□□ -0.34
VAMP1P23763 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
VAMP1P23763 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VAMP1P23763 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.92□□□□□ -0.34
VAMP1P23763 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
VAMP1P23763 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
VAMP1P23763 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VAMP1P23763 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VAMP1P23763 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.92□□□□□ -0.34
VAMP1P23763 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VAMP1P23763 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
VAMP1P23763 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VAMP1P23763 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.92□□□□□ -0.34
VAMP1P23763 PCDHA5-203ENST00000614258 4248 ntBASIC12.92□□□□□ -0.34
VAMP1P23763 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.92□□□□□ -0.34
VAMP1P23763 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.92□□□□□ -0.34
VAMP1P23763 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.92□□□□□ -0.34
VAMP1P23763 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
VAMP1P23763 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC12.92□□□□□ -0.34
VAMP1P23763 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.92□□□□□ -0.34
VAMP1P23763 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VAMP1P23763 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VAMP1P23763 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.92□□□□□ -0.34
VAMP1P23763 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VAMP1P23763 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.92□□□□□ -0.34
VAMP1P23763 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC12.92□□□□□ -0.34
VAMP1P23763 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VAMP1P23763 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.92□□□□□ -0.34
VAMP1P23763 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.92□□□□□ -0.34
VAMP1P23763 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.92□□□□□ -0.34
VAMP1P23763 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.92□□□□□ -0.34
VAMP1P23763 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC12.92□□□□□ -0.34
VAMP1P23763 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.92□□□□□ -0.34
VAMP1P23763 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
VAMP1P23763 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
VAMP1P23763 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VAMP1P23763 POLD4-207ENST00000531239 584 ntTSL 2 BASIC12.92□□□□□ -0.34
VAMP1P23763 CD63-210ENST00000550776 870 ntTSL 5 BASIC12.92□□□□□ -0.34
VAMP1P23763 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC12.92□□□□□ -0.34
VAMP1P23763 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC12.92□□□□□ -0.34
VAMP1P23763 AC091304.2-201ENST00000564639 760 ntBASIC12.92□□□□□ -0.34
VAMP1P23763 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.92□□□□□ -0.34
VAMP1P23763 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.92□□□□□ -0.34
VAMP1P23763 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.92□□□□□ -0.34
VAMP1P23763 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.92□□□□□ -0.34
VAMP1P23763 AC093458.2-201ENST00000623150 629 ntBASIC12.92□□□□□ -0.34
VAMP1P23763 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.92□□□□□ -0.34
VAMP1P23763 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VAMP1P23763 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.92□□□□□ -0.34
VAMP1P23763 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VAMP1P23763 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VAMP1P23763 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.92□□□□□ -0.34
VAMP1P23763 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VAMP1P23763 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VAMP1P23763 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms