Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.05□□□□□ -0.32
TNFSF4P23510 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.05□□□□□ -0.32
TNFSF4P23510 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.05□□□□□ -0.32
TNFSF4P23510 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.05□□□□□ -0.32
TNFSF4P23510 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
TNFSF4P23510 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TNFSF4P23510 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TNFSF4P23510 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TNFSF4P23510 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.05□□□□□ -0.32
TNFSF4P23510 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TNFSF4P23510 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TNFSF4P23510 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.05□□□□□ -0.32
TNFSF4P23510 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.05□□□□□ -0.32
TNFSF4P23510 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TNFSF4P23510 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TNFSF4P23510 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TNFSF4P23510 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.05□□□□□ -0.32
TNFSF4P23510 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
TNFSF4P23510 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TNFSF4P23510 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TNFSF4P23510 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
TNFSF4P23510 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.04□□□□□ -0.32
TNFSF4P23510 AC007787.1-201ENST00000588095 1583 ntBASIC13.04□□□□□ -0.32
TNFSF4P23510 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.04□□□□□ -0.32
TNFSF4P23510 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.04□□□□□ -0.32
TNFSF4P23510 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.04□□□□□ -0.32
TNFSF4P23510 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TNFSF4P23510 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TNFSF4P23510 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
TNFSF4P23510 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
TNFSF4P23510 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.04□□□□□ -0.32
TNFSF4P23510 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
TNFSF4P23510 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.04□□□□□ -0.32
TNFSF4P23510 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
TNFSF4P23510 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.04□□□□□ -0.32
TNFSF4P23510 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
TNFSF4P23510 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.04□□□□□ -0.32
TNFSF4P23510 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.04□□□□□ -0.32
TNFSF4P23510 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.04□□□□□ -0.32
TNFSF4P23510 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.04□□□□□ -0.32
TNFSF4P23510 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.04□□□□□ -0.32
TNFSF4P23510 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.04□□□□□ -0.32
TNFSF4P23510 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.04□□□□□ -0.32
TNFSF4P23510 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.04□□□□□ -0.32
TNFSF4P23510 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
TNFSF4P23510 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.04□□□□□ -0.32
TNFSF4P23510 C18orf15-201ENST00000623680 2534 ntBASIC13.04□□□□□ -0.32
TNFSF4P23510 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.04□□□□□ -0.32
TNFSF4P23510 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
TNFSF4P23510 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TNFSF4P23510 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.04□□□□□ -0.32
TNFSF4P23510 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.04□□□□□ -0.32
TNFSF4P23510 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TNFSF4P23510 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TNFSF4P23510 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
TNFSF4P23510 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
TNFSF4P23510 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms