Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.69□□□□□ -0.06
CAPN3P20807 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN3P20807 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.69□□□□□ -0.06
CAPN3P20807 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.69□□□□□ -0.06
CAPN3P20807 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CAPN3P20807 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
CAPN3P20807 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
CAPN3P20807 AL133267.1-201ENST00000398220 340 ntBASIC14.69□□□□□ -0.06
CAPN3P20807 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.69□□□□□ -0.06
CAPN3P20807 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.69□□□□□ -0.06
CAPN3P20807 RN7SL692P-201ENST00000464677 288 ntBASIC14.69□□□□□ -0.06
CAPN3P20807 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.69□□□□□ -0.06
CAPN3P20807 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.69□□□□□ -0.06
CAPN3P20807 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN3P20807 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN3P20807 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.69□□□□□ -0.06
CAPN3P20807 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.69□□□□□ -0.06
CAPN3P20807 AL645728.2-202ENST00000641679 227 ntBASIC14.69□□□□□ -0.06
CAPN3P20807 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.69□□□□□ -0.06
CAPN3P20807 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.69□□□□□ -0.06
CAPN3P20807 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN3P20807 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN3P20807 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CAPN3P20807 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN3P20807 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN3P20807 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CAPN3P20807 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN3P20807 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN3P20807 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN3P20807 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN3P20807 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CAPN3P20807 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.68□□□□□ -0.06
CAPN3P20807 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN3P20807 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN3P20807 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN3P20807 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN3P20807 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.68□□□□□ -0.06
CAPN3P20807 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CAPN3P20807 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CAPN3P20807 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN3P20807 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN3P20807 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.68□□□□□ -0.06
CAPN3P20807 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.68□□□□□ -0.06
CAPN3P20807 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN3P20807 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN3P20807 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN3P20807 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN3P20807 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN3P20807 COX5BP8-201ENST00000416911 349 ntBASIC14.68□□□□□ -0.06
CAPN3P20807 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.68□□□□□ -0.06
CAPN3P20807 GPS2P2-201ENST00000430745 888 ntBASIC14.68□□□□□ -0.06
CAPN3P20807 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN3P20807 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN3P20807 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.68□□□□□ -0.06
CAPN3P20807 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.68□□□□□ -0.06
CAPN3P20807 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.68□□□□□ -0.06
CAPN3P20807 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.68□□□□□ -0.06
CAPN3P20807 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN3P20807 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN3P20807 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN3P20807 AC007967.4-201ENST00000614700 386 ntBASIC14.68□□□□□ -0.06
CAPN3P20807 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CAPN3P20807 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.68□□□□□ -0.06
CAPN3P20807 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN3P20807 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN3P20807 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN3P20807 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CAPN3P20807 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN3P20807 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
CAPN3P20807 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.68□□□□□ -0.06
CAPN3P20807 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN3P20807 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.68□□□□□ -0.06
CAPN3P20807 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.68□□□□□ -0.06
CAPN3P20807 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN3P20807 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.68□□□□□ -0.06
CAPN3P20807 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN3P20807 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN3P20807 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CAPN3P20807 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN3P20807 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CAPN3P20807 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CAPN3P20807 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.68□□□□□ -0.06
CAPN3P20807 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CAPN3P20807 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CAPN3P20807 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CAPN3P20807 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.67□□□□□ -0.06
CAPN3P20807 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CAPN3P20807 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CAPN3P20807 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CAPN3P20807 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CAPN3P20807 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CAPN3P20807 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CAPN3P20807 Z97205.2-201ENST00000564697 1639 ntBASIC14.67□□□□□ -0.06
CAPN3P20807 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.67□□□□□ -0.06
CAPN3P20807 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CAPN3P20807 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CAPN3P20807 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CAPN3P20807 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CAPN3P20807 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CAPN3P20807 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms