Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCLP19338 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCLP19338 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NCLP19338 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCLP19338 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NCLP19338 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NCLP19338 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCLP19338 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCLP19338 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NCLP19338 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCLP19338 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC18.22■□□□□ 0.51
NCLP19338 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLP19338 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLP19338 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.22■□□□□ 0.51
NCLP19338 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLP19338 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLP19338 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
NCLP19338 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NCLP19338 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
NCLP19338 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLP19338 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.22■□□□□ 0.51
NCLP19338 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLP19338 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NCLP19338 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLP19338 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NCLP19338 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.22■□□□□ 0.51
NCLP19338 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NCLP19338 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NCLP19338 AL139010.1-201ENST00000454878 894 ntBASIC18.22■□□□□ 0.51
NCLP19338 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.22■□□□□ 0.51
NCLP19338 AC069335.1-201ENST00000489972 472 ntBASIC18.22■□□□□ 0.51
NCLP19338 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.22■□□□□ 0.51
NCLP19338 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.22■□□□□ 0.51
NCLP19338 LINC01225-203ENST00000563550 1244 ntBASIC18.22■□□□□ 0.51
NCLP19338 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLP19338 CR383656.2-201ENST00000548656 2254 ntBASIC18.22■□□□□ 0.51
NCLP19338 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC18.22■□□□□ 0.51
NCLP19338 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
NCLP19338 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLP19338 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLP19338 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NCLP19338 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.22■□□□□ 0.51
NCLP19338 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.22■□□□□ 0.51
NCLP19338 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLP19338 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLP19338 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
NCLP19338 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC18.22■□□□□ 0.51
NCLP19338 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
NCLP19338 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLP19338 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCLP19338 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NCLP19338 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NCLP19338 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.21■□□□□ 0.51
NCLP19338 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCLP19338 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC18.21■□□□□ 0.51
NCLP19338 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCLP19338 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCLP19338 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCLP19338 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NCLP19338 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.21■□□□□ 0.51
NCLP19338 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.21■□□□□ 0.51
NCLP19338 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NCLP19338 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.21■□□□□ 0.51
NCLP19338 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.21■□□□□ 0.51
NCLP19338 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.21■□□□□ 0.51
NCLP19338 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.21■□□□□ 0.51
NCLP19338 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.21■□□□□ 0.51
NCLP19338 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCLP19338 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC18.21■□□□□ 0.51
NCLP19338 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCLP19338 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NCLP19338 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NCLP19338 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NCLP19338 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.21■□□□□ 0.51
NCLP19338 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
NCLP19338 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.21■□□□□ 0.51
NCLP19338 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
NCLP19338 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC18.21■□□□□ 0.51
NCLP19338 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.21■□□□□ 0.51
NCLP19338 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCLP19338 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.21■□□□□ 0.51
NCLP19338 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCLP19338 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCLP19338 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCLP19338 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCLP19338 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCLP19338 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC18.2■□□□□ 0.5
NCLP19338 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCLP19338 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCLP19338 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.2■□□□□ 0.5
NCLP19338 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCLP19338 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC18.2■□□□□ 0.5
NCLP19338 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
NCLP19338 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCLP19338 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC18.2■□□□□ 0.5
NCLP19338 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC18.2■□□□□ 0.5
NCLP19338 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.2■□□□□ 0.5
NCLP19338 FAM220BP-201ENST00000377689 816 ntBASIC18.2■□□□□ 0.5
NCLP19338 KRT18P32-201ENST00000424695 1287 ntBASIC18.2■□□□□ 0.5
NCLP19338 FAM58DP-201ENST00000428076 619 ntBASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms