Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 CICP17-201ENST00000418553 2377 ntBASIC14.18□□□□□ -0.14
PRKCAP17252 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PRKCAP17252 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PRKCAP17252 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRKCAP17252 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
PRKCAP17252 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRKCAP17252 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRKCAP17252 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRKCAP17252 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PRKCAP17252 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PRKCAP17252 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.18□□□□□ -0.14
PRKCAP17252 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRKCAP17252 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRKCAP17252 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRKCAP17252 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRKCAP17252 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PRKCAP17252 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRKCAP17252 PTENP1-202ENST00000532280 3996 ntBASIC14.17□□□□□ -0.14
PRKCAP17252 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRKCAP17252 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.17□□□□□ -0.14
PRKCAP17252 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRKCAP17252 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRKCAP17252 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PRKCAP17252 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRKCAP17252 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRKCAP17252 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.17□□□□□ -0.14
PRKCAP17252 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PRKCAP17252 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRKCAP17252 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRKCAP17252 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRKCAP17252 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.17□□□□□ -0.14
PRKCAP17252 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PRKCAP17252 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRKCAP17252 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.17□□□□□ -0.14
PRKCAP17252 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PRKCAP17252 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.17□□□□□ -0.14
PRKCAP17252 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PRKCAP17252 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.17□□□□□ -0.14
PRKCAP17252 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.17□□□□□ -0.14
PRKCAP17252 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.17□□□□□ -0.14
PRKCAP17252 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRKCAP17252 AL391069.4-201ENST00000609583 481 ntBASIC14.17□□□□□ -0.14
PRKCAP17252 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.17□□□□□ -0.14
PRKCAP17252 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRKCAP17252 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PRKCAP17252 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRKCAP17252 AL023775.1-201ENST00000454907 1746 ntBASIC14.17□□□□□ -0.14
PRKCAP17252 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.17□□□□□ -0.14
PRKCAP17252 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRKCAP17252 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.17□□□□□ -0.14
PRKCAP17252 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.17□□□□□ -0.14
PRKCAP17252 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.17□□□□□ -0.14
PRKCAP17252 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRKCAP17252 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRKCAP17252 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
PRKCAP17252 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PRKCAP17252 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
PRKCAP17252 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.17□□□□□ -0.14
PRKCAP17252 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRKCAP17252 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PRKCAP17252 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PRKCAP17252 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.16□□□□□ -0.14
PRKCAP17252 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
PRKCAP17252 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.16□□□□□ -0.14
PRKCAP17252 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PRKCAP17252 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PRKCAP17252 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PRKCAP17252 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PRKCAP17252 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PRKCAP17252 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PRKCAP17252 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.16□□□□□ -0.14
PRKCAP17252 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PRKCAP17252 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PRKCAP17252 SPDYE19P-201ENST00000338590 713 ntBASIC14.16□□□□□ -0.14
PRKCAP17252 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PRKCAP17252 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.16□□□□□ -0.14
PRKCAP17252 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.16□□□□□ -0.14
PRKCAP17252 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.16□□□□□ -0.14
PRKCAP17252 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.16□□□□□ -0.14
PRKCAP17252 SPTLC1P1-201ENST00000447199 261 ntBASIC14.16□□□□□ -0.14
PRKCAP17252 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.16□□□□□ -0.14
PRKCAP17252 SERBP1P5-201ENST00000510079 1181 ntBASIC14.16□□□□□ -0.14
PRKCAP17252 TPRX2P-201ENST00000535362 881 ntBASIC14.16□□□□□ -0.14
PRKCAP17252 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.16□□□□□ -0.14
PRKCAP17252 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
PRKCAP17252 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.16□□□□□ -0.14
PRKCAP17252 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
PRKCAP17252 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PRKCAP17252 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.16□□□□□ -0.14
PRKCAP17252 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PRKCAP17252 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PRKCAP17252 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PRKCAP17252 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PRKCAP17252 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.16□□□□□ -0.14
PRKCAP17252 AC112693.3-201ENST00000624819 1983 ntBASIC14.16□□□□□ -0.14
PRKCAP17252 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PRKCAP17252 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.16□□□□□ -0.14
PRKCAP17252 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PRKCAP17252 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PRKCAP17252 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms