Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.86■□□□□ 0.45
TOP1P11387 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.86■□□□□ 0.45
TOP1P11387 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TOP1P11387 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.86■□□□□ 0.45
TOP1P11387 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
TOP1P11387 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.86■□□□□ 0.45
TOP1P11387 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP1P11387 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TOP1P11387 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP1P11387 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP1P11387 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP1P11387 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP1P11387 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP1P11387 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TOP1P11387 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TOP1P11387 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP1P11387 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TOP1P11387 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP1P11387 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP1P11387 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TOP1P11387 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP1P11387 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.85■□□□□ 0.45
TOP1P11387 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TOP1P11387 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TOP1P11387 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TOP1P11387 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TOP1P11387 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.85■□□□□ 0.45
TOP1P11387 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TOP1P11387 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TOP1P11387 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TOP1P11387 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TOP1P11387 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TOP1P11387 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.85■□□□□ 0.45
TOP1P11387 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TOP1P11387 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TOP1P11387 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TOP1P11387 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.85■□□□□ 0.45
TOP1P11387 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.85■□□□□ 0.45
TOP1P11387 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.85■□□□□ 0.45
TOP1P11387 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
TOP1P11387 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.85■□□□□ 0.45
TOP1P11387 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.85■□□□□ 0.45
TOP1P11387 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.85■□□□□ 0.45
TOP1P11387 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TOP1P11387 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TOP1P11387 AC012508.2-201ENST00000567613 1472 ntBASIC17.85■□□□□ 0.45
TOP1P11387 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TOP1P11387 AC126365.1-201ENST00000578585 1514 ntBASIC17.85■□□□□ 0.45
TOP1P11387 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.85■□□□□ 0.45
TOP1P11387 AL360270.3-201ENST00000609118 1348 ntBASIC17.85■□□□□ 0.45
TOP1P11387 AC138035.3-201ENST00000622706 2791 ntBASIC17.85■□□□□ 0.45
TOP1P11387 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TOP1P11387 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.85■□□□□ 0.45
TOP1P11387 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TOP1P11387 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TOP1P11387 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TOP1P11387 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP1P11387 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP1P11387 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP1P11387 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TOP1P11387 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TOP1P11387 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP1P11387 REXO1L4P-201ENST00000605109 1937 ntBASIC17.84■□□□□ 0.45
TOP1P11387 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.84■□□□□ 0.45
TOP1P11387 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP1P11387 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TOP1P11387 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP1P11387 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
TOP1P11387 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP1P11387 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
TOP1P11387 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP1P11387 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.84■□□□□ 0.45
TOP1P11387 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP1P11387 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP1P11387 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP1P11387 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP1P11387 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.84■□□□□ 0.45
TOP1P11387 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.84■□□□□ 0.45
TOP1P11387 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
TOP1P11387 EIF3FP3-201ENST00000434851 1086 ntBASIC17.84■□□□□ 0.45
TOP1P11387 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.84■□□□□ 0.45
TOP1P11387 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TOP1P11387 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP1P11387 AC022616.1-201ENST00000518688 554 ntBASIC17.84■□□□□ 0.45
TOP1P11387 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TOP1P11387 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.84■□□□□ 0.45
TOP1P11387 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.84■□□□□ 0.45
TOP1P11387 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.84■□□□□ 0.45
TOP1P11387 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TOP1P11387 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.84■□□□□ 0.45
TOP1P11387 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TOP1P11387 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP1P11387 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP1P11387 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP1P11387 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP1P11387 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.84■□□□□ 0.45
TOP1P11387 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TOP1P11387 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP1P11387 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TOP1P11387 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms