Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LAMP1P11279 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LAMP1P11279 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LAMP1P11279 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LAMP1P11279 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.42□□□□□ -0.1
LAMP1P11279 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LAMP1P11279 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.41□□□□□ -0.1
LAMP1P11279 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LAMP1P11279 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LAMP1P11279 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 MRPS18AP1-201ENST00000414458 589 ntBASIC14.41□□□□□ -0.1
LAMP1P11279 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.41□□□□□ -0.1
LAMP1P11279 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.41□□□□□ -0.1
LAMP1P11279 RN7SL399P-201ENST00000471648 279 ntBASIC14.41□□□□□ -0.1
LAMP1P11279 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.41□□□□□ -0.1
LAMP1P11279 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.41□□□□□ -0.1
LAMP1P11279 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 AC023310.3-201ENST00000557027 670 ntBASIC14.41□□□□□ -0.1
LAMP1P11279 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.41□□□□□ -0.1
LAMP1P11279 AC100756.1-201ENST00000562736 682 ntBASIC14.41□□□□□ -0.1
LAMP1P11279 AC138749.3-201ENST00000567691 622 ntBASIC14.41□□□□□ -0.1
LAMP1P11279 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.41□□□□□ -0.1
LAMP1P11279 AL049840.4-201ENST00000602422 811 ntBASIC14.41□□□□□ -0.1
LAMP1P11279 AC116165.1-201ENST00000611806 668 ntBASIC14.41□□□□□ -0.1
LAMP1P11279 AL662799.1-202ENST00000614205 422 ntBASIC14.41□□□□□ -0.1
LAMP1P11279 AC106028.4-201ENST00000614509 607 ntBASIC14.41□□□□□ -0.1
LAMP1P11279 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.41□□□□□ -0.1
LAMP1P11279 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.41□□□□□ -0.1
LAMP1P11279 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.41□□□□□ -0.1
LAMP1P11279 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.41□□□□□ -0.1
LAMP1P11279 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LAMP1P11279 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.41□□□□□ -0.1
LAMP1P11279 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LAMP1P11279 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LAMP1P11279 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LAMP1P11279 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
LAMP1P11279 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LAMP1P11279 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LAMP1P11279 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
LAMP1P11279 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LAMP1P11279 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LAMP1P11279 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LAMP1P11279 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LAMP1P11279 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LAMP1P11279 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LAMP1P11279 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.4□□□□□ -0.1
LAMP1P11279 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LAMP1P11279 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.4□□□□□ -0.1
LAMP1P11279 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LAMP1P11279 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.4□□□□□ -0.1
LAMP1P11279 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LAMP1P11279 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LAMP1P11279 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LAMP1P11279 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.4□□□□□ -0.1
LAMP1P11279 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LAMP1P11279 AL512638.1-201ENST00000457493 794 ntBASIC14.4□□□□□ -0.1
LAMP1P11279 VDAC1P7-201ENST00000462417 847 ntBASIC14.4□□□□□ -0.1
LAMP1P11279 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LAMP1P11279 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.4□□□□□ -0.1
LAMP1P11279 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LAMP1P11279 DOC2GP-202ENST00000514950 1163 ntBASIC14.4□□□□□ -0.1
LAMP1P11279 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.4□□□□□ -0.1
LAMP1P11279 TPRX2P-201ENST00000535362 881 ntBASIC14.4□□□□□ -0.1
LAMP1P11279 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.4□□□□□ -0.1
LAMP1P11279 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
LAMP1P11279 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.4□□□□□ -0.1
LAMP1P11279 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.4□□□□□ -0.1
LAMP1P11279 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.4□□□□□ -0.1
LAMP1P11279 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.4□□□□□ -0.1
LAMP1P11279 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.4□□□□□ -0.1
LAMP1P11279 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LAMP1P11279 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.4□□□□□ -0.1
LAMP1P11279 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.4□□□□□ -0.1
LAMP1P11279 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms