Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
THRAP10827 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.33■□□□□ 0.05
THRAP10827 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.33■□□□□ 0.05
THRAP10827 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
THRAP10827 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
THRAP10827 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
THRAP10827 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.33■□□□□ 0.05
THRAP10827 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
THRAP10827 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
THRAP10827 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
THRAP10827 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
THRAP10827 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
THRAP10827 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
THRAP10827 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
THRAP10827 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
THRAP10827 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
THRAP10827 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
THRAP10827 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
THRAP10827 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.33■□□□□ 0.04
THRAP10827 AC098850.1-201ENST00000419919 790 ntBASIC15.33■□□□□ 0.04
THRAP10827 AC007274.1-201ENST00000439805 662 ntBASIC15.33■□□□□ 0.04
THRAP10827 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.33■□□□□ 0.04
THRAP10827 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.33■□□□□ 0.04
THRAP10827 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
THRAP10827 RN7SL837P-201ENST00000463010 287 ntBASIC15.33■□□□□ 0.04
THRAP10827 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
THRAP10827 IGHV3-71-201ENST00000523324 359 ntBASIC15.33■□□□□ 0.04
THRAP10827 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.33■□□□□ 0.04
THRAP10827 HILS1-202ENST00000545329 423 ntBASIC15.33■□□□□ 0.04
THRAP10827 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
THRAP10827 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
THRAP10827 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.33■□□□□ 0.04
THRAP10827 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.33■□□□□ 0.04
THRAP10827 AL162274.1-201ENST00000617191 1098 ntBASIC15.33■□□□□ 0.04
THRAP10827 MIR6752-201ENST00000618442 71 ntBASIC15.33■□□□□ 0.04
THRAP10827 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
THRAP10827 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
THRAP10827 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.33■□□□□ 0.04
THRAP10827 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
THRAP10827 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
THRAP10827 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
THRAP10827 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
THRAP10827 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
THRAP10827 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
THRAP10827 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.33■□□□□ 0.04
THRAP10827 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
THRAP10827 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
THRAP10827 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.33■□□□□ 0.04
THRAP10827 KRT8P37-201ENST00000451609 1420 ntBASIC15.33■□□□□ 0.04
THRAP10827 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
THRAP10827 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
THRAP10827 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
THRAP10827 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
THRAP10827 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
THRAP10827 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
THRAP10827 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
THRAP10827 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
THRAP10827 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.32■□□□□ 0.04
THRAP10827 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
THRAP10827 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
THRAP10827 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THRAP10827 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THRAP10827 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
THRAP10827 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
THRAP10827 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
THRAP10827 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
THRAP10827 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
THRAP10827 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THRAP10827 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
THRAP10827 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
THRAP10827 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.32■□□□□ 0.04
THRAP10827 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
THRAP10827 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.32■□□□□ 0.04
THRAP10827 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.32■□□□□ 0.04
THRAP10827 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.32■□□□□ 0.04
THRAP10827 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
THRAP10827 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.32■□□□□ 0.04
THRAP10827 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
THRAP10827 AC106886.1-201ENST00000568660 600 ntBASIC15.32■□□□□ 0.04
THRAP10827 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.32■□□□□ 0.04
THRAP10827 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.32■□□□□ 0.04
THRAP10827 TMEM261P1-201ENST00000604899 340 ntBASIC15.32■□□□□ 0.04
THRAP10827 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
THRAP10827 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
THRAP10827 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
THRAP10827 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
THRAP10827 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
THRAP10827 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
THRAP10827 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
THRAP10827 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
THRAP10827 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THRAP10827 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
THRAP10827 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.32■□□□□ 0.04
THRAP10827 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THRAP10827 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THRAP10827 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms