Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CD28P10747 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD28P10747 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC11.91□□□□□ -0.5
CD28P10747 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CD28P10747 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CD28P10747 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD28P10747 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD28P10747 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD28P10747 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
CD28P10747 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD28P10747 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CD28P10747 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
CD28P10747 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD28P10747 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC11.91□□□□□ -0.5
CD28P10747 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC11.91□□□□□ -0.5
CD28P10747 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC11.91□□□□□ -0.5
CD28P10747 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD28P10747 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD28P10747 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD28P10747 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD28P10747 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD28P10747 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD28P10747 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD28P10747 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD28P10747 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC11.9□□□□□ -0.5
CD28P10747 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD28P10747 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
CD28P10747 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD28P10747 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC11.9□□□□□ -0.5
CD28P10747 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC11.9□□□□□ -0.5
CD28P10747 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD28P10747 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD28P10747 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
CD28P10747 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD28P10747 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC11.9□□□□□ -0.5
CD28P10747 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD28P10747 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC11.9□□□□□ -0.5
CD28P10747 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD28P10747 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC11.9□□□□□ -0.5
CD28P10747 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD28P10747 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD28P10747 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC11.9□□□□□ -0.5
CD28P10747 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
CD28P10747 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
CD28P10747 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
CD28P10747 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD28P10747 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
CD28P10747 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
CD28P10747 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
CD28P10747 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD28P10747 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CD28P10747 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CD28P10747 AL139094.1-201ENST00000405549 1188 ntBASIC11.9□□□□□ -0.5
CD28P10747 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
CD28P10747 AC006033.1-201ENST00000440505 426 ntBASIC11.9□□□□□ -0.5
CD28P10747 MTX1P1-201ENST00000440904 838 ntBASIC11.9□□□□□ -0.5
CD28P10747 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC11.9□□□□□ -0.5
CD28P10747 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC11.9□□□□□ -0.5
CD28P10747 ZNF767P-206ENST00000513792 565 ntBASIC11.9□□□□□ -0.5
CD28P10747 AC103702.1-201ENST00000548801 2630 ntBASIC11.9□□□□□ -0.5
CD28P10747 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC11.9□□□□□ -0.5
CD28P10747 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC11.9□□□□□ -0.5
CD28P10747 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
CD28P10747 RN7SL48P-201ENST00000579283 293 ntBASIC11.9□□□□□ -0.5
CD28P10747 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC11.9□□□□□ -0.5
CD28P10747 KLK3-211ENST00000597483 810 ntTSL 2 BASIC11.9□□□□□ -0.5
CD28P10747 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CD28P10747 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
CD28P10747 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC11.9□□□□□ -0.5
CD28P10747 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC11.9□□□□□ -0.5
CD28P10747 PRSS30P-206ENST00000641773 873 ntBASIC11.9□□□□□ -0.5
CD28P10747 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD28P10747 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
CD28P10747 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD28P10747 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD28P10747 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD28P10747 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC11.9□□□□□ -0.5
CD28P10747 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC11.9□□□□□ -0.5
CD28P10747 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD28P10747 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD28P10747 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
CD28P10747 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC11.9□□□□□ -0.5
CD28P10747 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CD28P10747 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CD28P10747 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CD28P10747 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC11.9□□□□□ -0.5
CD28P10747 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CD28P10747 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
CD28P10747 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
CD28P10747 BANP-201ENST00000286122 2368 ntTSL 5 BASIC11.9□□□□□ -0.51
CD28P10747 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC11.9□□□□□ -0.51
CD28P10747 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
CD28P10747 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC11.9□□□□□ -0.51
CD28P10747 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD28P10747 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
CD28P10747 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC11.89□□□□□ -0.51
CD28P10747 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC11.89□□□□□ -0.51
CD28P10747 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
CD28P10747 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD28P10747 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms