Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.96■□□□□ 0.15
RARAP10276 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.96■□□□□ 0.15
RARAP10276 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RARAP10276 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.96■□□□□ 0.15
RARAP10276 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RARAP10276 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.96■□□□□ 0.15
RARAP10276 AL049840.4-201ENST00000602422 811 ntBASIC15.96■□□□□ 0.15
RARAP10276 AC107373.2-201ENST00000607735 490 ntBASIC15.96■□□□□ 0.15
RARAP10276 MIR8072-201ENST00000614241 80 ntBASIC15.96■□□□□ 0.15
RARAP10276 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.96■□□□□ 0.15
RARAP10276 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.96■□□□□ 0.15
RARAP10276 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RARAP10276 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RARAP10276 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RARAP10276 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RARAP10276 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RARAP10276 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RARAP10276 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RARAP10276 LINC01230-201ENST00000625222 3017 ntBASIC15.96■□□□□ 0.15
RARAP10276 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RARAP10276 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.96■□□□□ 0.15
RARAP10276 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RARAP10276 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RARAP10276 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
RARAP10276 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RARAP10276 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
RARAP10276 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RARAP10276 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
RARAP10276 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.95■□□□□ 0.14
RARAP10276 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RARAP10276 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RARAP10276 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.95■□□□□ 0.14
RARAP10276 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.95■□□□□ 0.14
RARAP10276 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.95■□□□□ 0.14
RARAP10276 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RARAP10276 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
RARAP10276 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.95■□□□□ 0.14
RARAP10276 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.95■□□□□ 0.14
RARAP10276 VDAC1P7-201ENST00000462417 847 ntBASIC15.95■□□□□ 0.14
RARAP10276 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 SERBP1P5-201ENST00000510079 1181 ntBASIC15.95■□□□□ 0.14
RARAP10276 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.95■□□□□ 0.14
RARAP10276 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.95■□□□□ 0.14
RARAP10276 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.95■□□□□ 0.14
RARAP10276 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RARAP10276 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.95■□□□□ 0.14
RARAP10276 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.95■□□□□ 0.14
RARAP10276 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.95■□□□□ 0.14
RARAP10276 RRP7BP-205ENST00000566851 833 ntBASIC15.95■□□□□ 0.14
RARAP10276 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.95■□□□□ 0.14
RARAP10276 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.95■□□□□ 0.14
RARAP10276 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.95■□□□□ 0.14
RARAP10276 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.95■□□□□ 0.14
RARAP10276 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RARAP10276 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RARAP10276 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
RARAP10276 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RARAP10276 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RARAP10276 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RARAP10276 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RARAP10276 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RARAP10276 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RARAP10276 AC079781.5-202ENST00000641784 3743 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms