Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC6P09630 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.97■□□□□ 0.31
HOXC6P09630 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC6P09630 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.97■□□□□ 0.31
HOXC6P09630 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.97■□□□□ 0.31
HOXC6P09630 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.97■□□□□ 0.31
HOXC6P09630 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
HOXC6P09630 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.97■□□□□ 0.31
HOXC6P09630 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.97■□□□□ 0.31
HOXC6P09630 Z98259.2-201ENST00000641583 609 ntBASIC16.97■□□□□ 0.31
HOXC6P09630 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC6P09630 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC6P09630 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.97■□□□□ 0.31
HOXC6P09630 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC6P09630 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.97■□□□□ 0.31
HOXC6P09630 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.97■□□□□ 0.31
HOXC6P09630 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC6P09630 AC006058.4-201ENST00000624016 1670 ntBASIC16.97■□□□□ 0.31
HOXC6P09630 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC6P09630 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.97■□□□□ 0.31
HOXC6P09630 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC6P09630 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC6P09630 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC6P09630 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.96■□□□□ 0.31
HOXC6P09630 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
HOXC6P09630 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC6P09630 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC6P09630 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC6P09630 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC6P09630 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
HOXC6P09630 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC6P09630 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HOXC6P09630 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC6P09630 MBLAC2-202ENST00000514906 1936 ntBASIC16.96■□□□□ 0.31
HOXC6P09630 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC6P09630 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.96■□□□□ 0.31
HOXC6P09630 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC6P09630 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.96■□□□□ 0.31
HOXC6P09630 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
HOXC6P09630 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC6P09630 AC239868.1-201ENST00000369385 493 ntBASIC16.96■□□□□ 0.31
HOXC6P09630 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC6P09630 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC6P09630 FGFR3P1-201ENST00000449999 601 ntBASIC16.96■□□□□ 0.31
HOXC6P09630 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.96■□□□□ 0.31
HOXC6P09630 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.96■□□□□ 0.31
HOXC6P09630 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC6P09630 ALG3P1-201ENST00000508806 1114 ntBASIC16.96■□□□□ 0.31
HOXC6P09630 NPM1P43-201ENST00000558669 786 ntBASIC16.96■□□□□ 0.31
HOXC6P09630 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.96■□□□□ 0.31
HOXC6P09630 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.96■□□□□ 0.31
HOXC6P09630 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
HOXC6P09630 AC008805.1-201ENST00000590892 364 ntBASIC16.96■□□□□ 0.31
HOXC6P09630 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.96■□□□□ 0.31
HOXC6P09630 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
HOXC6P09630 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.96■□□□□ 0.31
HOXC6P09630 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.96■□□□□ 0.31
HOXC6P09630 COX6A1P2-201ENST00000620597 330 ntBASIC16.96■□□□□ 0.31
HOXC6P09630 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC6P09630 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC6P09630 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC6P09630 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC6P09630 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC6P09630 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.96■□□□□ 0.31
HOXC6P09630 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.96■□□□□ 0.31
HOXC6P09630 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC6P09630 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC6P09630 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HOXC6P09630 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC6P09630 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
HOXC6P09630 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HOXC6P09630 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.96■□□□□ 0.3
HOXC6P09630 REXO1L4P-201ENST00000605109 1937 ntBASIC16.96■□□□□ 0.3
HOXC6P09630 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HOXC6P09630 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HOXC6P09630 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.96■□□□□ 0.3
HOXC6P09630 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HOXC6P09630 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HOXC6P09630 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC6P09630 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC6P09630 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.95■□□□□ 0.3
HOXC6P09630 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.95■□□□□ 0.3
HOXC6P09630 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
HOXC6P09630 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC6P09630 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
HOXC6P09630 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HOXC6P09630 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.95■□□□□ 0.3
HOXC6P09630 AC012508.2-201ENST00000567613 1472 ntBASIC16.95■□□□□ 0.3
HOXC6P09630 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC6P09630 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC6P09630 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.95■□□□□ 0.3
HOXC6P09630 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC6P09630 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC6P09630 AC078875.1-201ENST00000431907 724 ntBASIC16.95■□□□□ 0.3
HOXC6P09630 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC6P09630 SCARNA21-201ENST00000517026 139 ntBASIC16.95■□□□□ 0.3
HOXC6P09630 IGLV3-15-201ENST00000518356 244 ntBASIC16.95■□□□□ 0.3
HOXC6P09630 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.95■□□□□ 0.3
HOXC6P09630 POU5F1P2-201ENST00000521750 823 ntBASIC16.95■□□□□ 0.3
HOXC6P09630 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms