Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAPDHP04406 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
GAPDHP04406 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.79□□□□□ -0.36
GAPDHP04406 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.79□□□□□ -0.36
GAPDHP04406 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
GAPDHP04406 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.79□□□□□ -0.36
GAPDHP04406 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.79□□□□□ -0.36
GAPDHP04406 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAPDHP04406 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAPDHP04406 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.79□□□□□ -0.36
GAPDHP04406 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAPDHP04406 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
GAPDHP04406 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAPDHP04406 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
GAPDHP04406 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAPDHP04406 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAPDHP04406 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.79□□□□□ -0.36
GAPDHP04406 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.79□□□□□ -0.36
GAPDHP04406 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAPDHP04406 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GAPDHP04406 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.79□□□□□ -0.36
GAPDHP04406 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GAPDHP04406 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GAPDHP04406 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAPDHP04406 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GAPDHP04406 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.79□□□□□ -0.36
GAPDHP04406 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.79□□□□□ -0.36
GAPDHP04406 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.79□□□□□ -0.36
GAPDHP04406 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.79□□□□□ -0.36
GAPDHP04406 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC12.79□□□□□ -0.36
GAPDHP04406 PMS2P2-201ENST00000425039 1128 ntBASIC12.79□□□□□ -0.36
GAPDHP04406 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.79□□□□□ -0.36
GAPDHP04406 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12.79□□□□□ -0.36
GAPDHP04406 TARDBPP1-201ENST00000442013 1203 ntBASIC12.79□□□□□ -0.36
GAPDHP04406 AL512638.1-201ENST00000457493 794 ntBASIC12.79□□□□□ -0.36
GAPDHP04406 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.79□□□□□ -0.36
GAPDHP04406 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.79□□□□□ -0.36
GAPDHP04406 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.79□□□□□ -0.36
GAPDHP04406 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC12.79□□□□□ -0.36
GAPDHP04406 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.79□□□□□ -0.36
GAPDHP04406 AC093512.1-201ENST00000617969 520 ntBASIC12.79□□□□□ -0.36
GAPDHP04406 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.79□□□□□ -0.36
GAPDHP04406 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
GAPDHP04406 AL590560.3-201ENST00000623350 461 ntBASIC12.79□□□□□ -0.36
GAPDHP04406 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GAPDHP04406 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GAPDHP04406 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAPDHP04406 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
GAPDHP04406 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.79□□□□□ -0.36
GAPDHP04406 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.79□□□□□ -0.36
GAPDHP04406 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAPDHP04406 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GAPDHP04406 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GAPDHP04406 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
GAPDHP04406 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
GAPDHP04406 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAPDHP04406 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.79□□□□□ -0.36
GAPDHP04406 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAPDHP04406 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.79□□□□□ -0.36
GAPDHP04406 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GAPDHP04406 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
GAPDHP04406 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAPDHP04406 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAPDHP04406 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GAPDHP04406 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.79□□□□□ -0.36
GAPDHP04406 AC100757.3-201ENST00000622361 1406 ntBASIC12.79□□□□□ -0.36
GAPDHP04406 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GAPDHP04406 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
GAPDHP04406 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAPDHP04406 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAPDHP04406 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
GAPDHP04406 TCAF1P1-201ENST00000414990 2232 ntBASIC12.78□□□□□ -0.36
GAPDHP04406 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GAPDHP04406 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.78□□□□□ -0.36
GAPDHP04406 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
GAPDHP04406 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.78□□□□□ -0.36
GAPDHP04406 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GAPDHP04406 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAPDHP04406 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.78□□□□□ -0.36
GAPDHP04406 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.78□□□□□ -0.36
GAPDHP04406 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
GAPDHP04406 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.78□□□□□ -0.36
GAPDHP04406 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.78□□□□□ -0.36
GAPDHP04406 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.78□□□□□ -0.36
GAPDHP04406 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.78□□□□□ -0.36
GAPDHP04406 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.78□□□□□ -0.36
GAPDHP04406 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
GAPDHP04406 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAPDHP04406 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAPDHP04406 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
GAPDHP04406 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GAPDHP04406 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAPDHP04406 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAPDHP04406 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
GAPDHP04406 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.78□□□□□ -0.36
GAPDHP04406 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GAPDHP04406 AC092580.3-201ENST00000430932 139 ntBASIC12.78□□□□□ -0.36
GAPDHP04406 AC055876.3-201ENST00000431496 288 ntBASIC12.78□□□□□ -0.36
GAPDHP04406 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.78□□□□□ -0.36
GAPDHP04406 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms