Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 LINC01101-201ENST00000622953 1884 ntBASIC9.14□□□□□ -0.95
APOBP04114 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
APOBP04114 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC9.14□□□□□ -0.95
APOBP04114 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC9.14□□□□□ -0.95
APOBP04114 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 CCL25-202ENST00000315626 450 ntTSL 2 BASIC9.14□□□□□ -0.95
APOBP04114 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
APOBP04114 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 RPL14-203ENST00000416518 812 ntTSL 3 BASIC9.14□□□□□ -0.95
APOBP04114 AC092896.1-201ENST00000465850 380 ntBASIC9.14□□□□□ -0.95
APOBP04114 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.95
APOBP04114 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC9.14□□□□□ -0.95
APOBP04114 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
APOBP04114 MIR6125-201ENST00000618986 96 ntBASIC9.14□□□□□ -0.95
APOBP04114 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
APOBP04114 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC9.13□□□□□ -0.95
APOBP04114 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
APOBP04114 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 AHCYP4-201ENST00000419201 1315 ntBASIC9.13□□□□□ -0.95
APOBP04114 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC9.13□□□□□ -0.95
APOBP04114 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC9.13□□□□□ -0.95
APOBP04114 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
APOBP04114 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC9.13□□□□□ -0.95
APOBP04114 RPS23-204ENST00000507980 836 ntTSL 2 BASIC9.13□□□□□ -0.95
APOBP04114 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC9.13□□□□□ -0.95
APOBP04114 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
APOBP04114 BX088702.1-201ENST00000610784 235 ntBASIC9.13□□□□□ -0.95
APOBP04114 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
APOBP04114 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
APOBP04114 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC9.13□□□□□ -0.95
APOBP04114 AC021305.1-201ENST00000520656 1514 ntBASIC9.13□□□□□ -0.95
APOBP04114 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 AC006504.5-208ENST00000588784 2401 ntBASIC9.13□□□□□ -0.95
APOBP04114 LILRP1-201ENST00000444199 1370 ntBASIC9.13□□□□□ -0.95
APOBP04114 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
APOBP04114 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC9.13□□□□□ -0.95
APOBP04114 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC9.13□□□□□ -0.95
APOBP04114 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC9.13□□□□□ -0.95
APOBP04114 SEPHS2P1-201ENST00000511618 1162 ntBASIC9.13□□□□□ -0.95
APOBP04114 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC9.13□□□□□ -0.95
APOBP04114 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC9.13□□□□□ -0.95
APOBP04114 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
APOBP04114 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 AGGF1P1-201ENST00000509500 2073 ntBASIC9.13□□□□□ -0.95
APOBP04114 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC9.13□□□□□ -0.95
APOBP04114 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC9.13□□□□□ -0.95
APOBP04114 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
APOBP04114 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
APOBP04114 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 OR52M2P-201ENST00000414298 959 ntBASIC9.13□□□□□ -0.95
APOBP04114 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC9.13□□□□□ -0.95
APOBP04114 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC9.13□□□□□ -0.95
APOBP04114 NAV1-210ENST00000593583 726 ntBASIC9.13□□□□□ -0.95
APOBP04114 AC110057.1-201ENST00000636031 898 ntBASIC9.13□□□□□ -0.95
APOBP04114 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC9.13□□□□□ -0.95
APOBP04114 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC9.13□□□□□ -0.95
APOBP04114 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
APOBP04114 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
APOBP04114 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC9.12□□□□□ -0.95
APOBP04114 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC9.12□□□□□ -0.95
APOBP04114 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 RPL18AP8-201ENST00000486071 528 ntBASIC9.12□□□□□ -0.95
APOBP04114 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC9.12□□□□□ -0.95
APOBP04114 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC9.12□□□□□ -0.95
APOBP04114 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC9.12□□□□□ -0.95
APOBP04114 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC9.12□□□□□ -0.95
APOBP04114 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
APOBP04114 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms