Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CNOT4O95628 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CNOT4O95628 AC144831.1-201ENST00000573312 2656 ntBASIC13.58□□□□□ -0.24
CNOT4O95628 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CNOT4O95628 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CNOT4O95628 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CNOT4O95628 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CNOT4O95628 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CNOT4O95628 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CNOT4O95628 AC093525.8-201ENST00000624099 1342 ntBASIC13.58□□□□□ -0.24
CNOT4O95628 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
CNOT4O95628 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CNOT4O95628 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.58□□□□□ -0.24
CNOT4O95628 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
CNOT4O95628 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CNOT4O95628 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CNOT4O95628 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CNOT4O95628 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CNOT4O95628 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CNOT4O95628 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CNOT4O95628 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CNOT4O95628 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CNOT4O95628 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CNOT4O95628 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.58□□□□□ -0.24
CNOT4O95628 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CNOT4O95628 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CNOT4O95628 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CNOT4O95628 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.57□□□□□ -0.24
CNOT4O95628 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CNOT4O95628 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CNOT4O95628 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.57□□□□□ -0.24
CNOT4O95628 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CNOT4O95628 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CNOT4O95628 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CNOT4O95628 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CNOT4O95628 AC090616.6-203ENST00000579186 1945 ntBASIC13.57□□□□□ -0.24
CNOT4O95628 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.57□□□□□ -0.24
CNOT4O95628 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
CNOT4O95628 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CNOT4O95628 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CNOT4O95628 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CNOT4O95628 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.57□□□□□ -0.24
CNOT4O95628 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.57□□□□□ -0.24
CNOT4O95628 AL355864.2-201ENST00000447420 863 ntBASIC13.57□□□□□ -0.24
CNOT4O95628 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CNOT4O95628 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CNOT4O95628 AC104989.1-201ENST00000519711 778 ntBASIC13.57□□□□□ -0.24
CNOT4O95628 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.57□□□□□ -0.24
CNOT4O95628 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CNOT4O95628 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.57□□□□□ -0.24
CNOT4O95628 AC008735.3-201ENST00000596646 500 ntBASIC13.57□□□□□ -0.24
CNOT4O95628 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.57□□□□□ -0.24
CNOT4O95628 RPSAP52-203ENST00000622976 1023 ntBASIC13.57□□□□□ -0.24
CNOT4O95628 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CNOT4O95628 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CNOT4O95628 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CNOT4O95628 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CNOT4O95628 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CNOT4O95628 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
CNOT4O95628 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CNOT4O95628 CICP13-201ENST00000422015 2789 ntBASIC13.57□□□□□ -0.24
CNOT4O95628 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CNOT4O95628 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
CNOT4O95628 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.57□□□□□ -0.24
CNOT4O95628 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.57□□□□□ -0.24
CNOT4O95628 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
CNOT4O95628 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CNOT4O95628 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.57□□□□□ -0.24
CNOT4O95628 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.57□□□□□ -0.24
CNOT4O95628 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CNOT4O95628 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.57□□□□□ -0.24
CNOT4O95628 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.57□□□□□ -0.24
CNOT4O95628 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CNOT4O95628 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CNOT4O95628 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.56□□□□□ -0.24
CNOT4O95628 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CNOT4O95628 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CNOT4O95628 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CNOT4O95628 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.56□□□□□ -0.24
CNOT4O95628 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CNOT4O95628 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.56□□□□□ -0.24
CNOT4O95628 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.56□□□□□ -0.24
CNOT4O95628 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.56□□□□□ -0.24
CNOT4O95628 AC093433.1-201ENST00000458048 571 ntBASIC13.56□□□□□ -0.24
CNOT4O95628 USP32P1-208ENST00000506594 1164 ntBASIC13.56□□□□□ -0.24
CNOT4O95628 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms