Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CSPG5O95196 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.33■□□□□ 0.21
CSPG5O95196 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.33■□□□□ 0.21
CSPG5O95196 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CSPG5O95196 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CSPG5O95196 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CSPG5O95196 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CSPG5O95196 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CSPG5O95196 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSPG5O95196 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSPG5O95196 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSPG5O95196 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSPG5O95196 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSPG5O95196 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.33■□□□□ 0.2
CSPG5O95196 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSPG5O95196 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSPG5O95196 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CSPG5O95196 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSPG5O95196 ACTG1P2-201ENST00000415776 1125 ntBASIC16.33■□□□□ 0.2
CSPG5O95196 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.33■□□□□ 0.2
CSPG5O95196 AC079178.1-201ENST00000420915 656 ntBASIC16.33■□□□□ 0.2
CSPG5O95196 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.33■□□□□ 0.2
CSPG5O95196 ACTG1P11-201ENST00000425411 1125 ntBASIC16.33■□□□□ 0.2
CSPG5O95196 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSPG5O95196 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.33■□□□□ 0.2
CSPG5O95196 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.33■□□□□ 0.2
CSPG5O95196 RN7SL48P-201ENST00000579283 293 ntBASIC16.33■□□□□ 0.2
CSPG5O95196 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.33■□□□□ 0.2
CSPG5O95196 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CSPG5O95196 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
CSPG5O95196 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.33■□□□□ 0.2
CSPG5O95196 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.33■□□□□ 0.2
CSPG5O95196 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSPG5O95196 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
CSPG5O95196 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CSPG5O95196 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.33■□□□□ 0.2
CSPG5O95196 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSPG5O95196 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.33■□□□□ 0.2
CSPG5O95196 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSPG5O95196 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSPG5O95196 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSPG5O95196 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
CSPG5O95196 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSPG5O95196 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSPG5O95196 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSPG5O95196 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSPG5O95196 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.33■□□□□ 0.2
CSPG5O95196 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSPG5O95196 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSPG5O95196 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.33■□□□□ 0.2
CSPG5O95196 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG5O95196 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
CSPG5O95196 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG5O95196 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CSPG5O95196 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG5O95196 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG5O95196 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG5O95196 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CSPG5O95196 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG5O95196 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG5O95196 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.32■□□□□ 0.2
CSPG5O95196 MIR33B-201ENST00000385104 96 ntBASIC16.32■□□□□ 0.2
CSPG5O95196 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG5O95196 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CSPG5O95196 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CSPG5O95196 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG5O95196 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.32■□□□□ 0.2
CSPG5O95196 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.32■□□□□ 0.2
CSPG5O95196 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG5O95196 HIST2H2BB-201ENST00000449108 381 ntBASIC16.32■□□□□ 0.2
CSPG5O95196 AC114812.1-204ENST00000449669 728 ntBASIC16.32■□□□□ 0.2
CSPG5O95196 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG5O95196 RPS2P36-201ENST00000456516 831 ntBASIC16.32■□□□□ 0.2
CSPG5O95196 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.32■□□□□ 0.2
CSPG5O95196 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CSPG5O95196 AC021723.1-201ENST00000486306 515 ntBASIC16.32■□□□□ 0.2
CSPG5O95196 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CSPG5O95196 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CSPG5O95196 AC134698.3-201ENST00000523880 214 ntBASIC16.32■□□□□ 0.2
CSPG5O95196 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.32■□□□□ 0.2
CSPG5O95196 MIR4722-201ENST00000578292 60 ntBASIC16.32■□□□□ 0.2
CSPG5O95196 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG5O95196 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.32■□□□□ 0.2
CSPG5O95196 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CSPG5O95196 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.32■□□□□ 0.2
CSPG5O95196 MIR7845-201ENST00000618396 99 ntBASIC16.32■□□□□ 0.2
CSPG5O95196 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CSPG5O95196 AL158070.2-201ENST00000623713 1621 ntBASIC16.32■□□□□ 0.2
CSPG5O95196 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.32■□□□□ 0.2
CSPG5O95196 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG5O95196 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG5O95196 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSPG5O95196 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CSPG5O95196 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CSPG5O95196 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CSPG5O95196 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
CSPG5O95196 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG5O95196 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG5O95196 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSPG5O95196 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms