Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
NKX2-2O95096 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX2-2O95096 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX2-2O95096 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.99□□□□□ -0.17
NKX2-2O95096 BAATP1-201ENST00000412284 1225 ntBASIC13.99□□□□□ -0.17
NKX2-2O95096 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX2-2O95096 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NKX2-2O95096 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
NKX2-2O95096 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.99□□□□□ -0.17
NKX2-2O95096 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.99□□□□□ -0.17
NKX2-2O95096 PTP4A1P2-201ENST00000546033 454 ntBASIC13.99□□□□□ -0.17
NKX2-2O95096 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
NKX2-2O95096 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
NKX2-2O95096 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
NKX2-2O95096 MIR5189-201ENST00000577370 114 ntBASIC13.99□□□□□ -0.17
NKX2-2O95096 MIR3197-201ENST00000582241 73 ntBASIC13.99□□□□□ -0.17
NKX2-2O95096 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.99□□□□□ -0.17
NKX2-2O95096 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.99□□□□□ -0.17
NKX2-2O95096 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX2-2O95096 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NKX2-2O95096 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.99□□□□□ -0.17
NKX2-2O95096 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
NKX2-2O95096 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.99□□□□□ -0.17
NKX2-2O95096 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.99□□□□□ -0.17
NKX2-2O95096 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX2-2O95096 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.99□□□□□ -0.17
NKX2-2O95096 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NKX2-2O95096 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX2-2O95096 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX2-2O95096 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX2-2O95096 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.99□□□□□ -0.17
NKX2-2O95096 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
NKX2-2O95096 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX2-2O95096 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX2-2O95096 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NKX2-2O95096 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX2-2O95096 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
NKX2-2O95096 MSTO2P-201ENST00000314835 1709 ntBASIC13.98□□□□□ -0.17
NKX2-2O95096 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NKX2-2O95096 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NKX2-2O95096 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX2-2O95096 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX2-2O95096 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NKX2-2O95096 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.98□□□□□ -0.17
NKX2-2O95096 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.98□□□□□ -0.17
NKX2-2O95096 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NKX2-2O95096 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NKX2-2O95096 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.98□□□□□ -0.17
NKX2-2O95096 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NKX2-2O95096 RN7SL752P-201ENST00000463779 287 ntBASIC13.98□□□□□ -0.17
NKX2-2O95096 AC011495.1-201ENST00000498085 584 ntBASIC13.98□□□□□ -0.17
NKX2-2O95096 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.98□□□□□ -0.17
NKX2-2O95096 TDH-203ENST00000531764 1110 ntBASIC13.98□□□□□ -0.17
NKX2-2O95096 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.98□□□□□ -0.17
NKX2-2O95096 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NKX2-2O95096 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.98□□□□□ -0.17
NKX2-2O95096 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.98□□□□□ -0.17
NKX2-2O95096 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
NKX2-2O95096 MTHFR-210ENST00000641407 2387 ntBASIC13.98□□□□□ -0.17
NKX2-2O95096 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX2-2O95096 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX2-2O95096 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX2-2O95096 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NKX2-2O95096 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
NKX2-2O95096 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX2-2O95096 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NKX2-2O95096 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX2-2O95096 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NKX2-2O95096 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NKX2-2O95096 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
NKX2-2O95096 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NKX2-2O95096 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX2-2O95096 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX2-2O95096 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX2-2O95096 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NKX2-2O95096 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NKX2-2O95096 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.98□□□□□ -0.17
NKX2-2O95096 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.97□□□□□ -0.17
NKX2-2O95096 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-2O95096 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
NKX2-2O95096 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.97□□□□□ -0.17
NKX2-2O95096 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-2O95096 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NKX2-2O95096 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-2O95096 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-2O95096 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-2O95096 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-2O95096 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-2O95096 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-2O95096 AC134312.5-201ENST00000568031 1313 ntBASIC13.97□□□□□ -0.17
NKX2-2O95096 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
NKX2-2O95096 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-2O95096 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-2O95096 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-2O95096 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-2O95096 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-2O95096 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.97□□□□□ -0.17
NKX2-2O95096 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX2-2O95096 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.97□□□□□ -0.17
NKX2-2O95096 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms