Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC10.27□□□□□ -0.77
SNCGO76070 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC10.27□□□□□ -0.77
SNCGO76070 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SNCGO76070 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC10.27□□□□□ -0.77
SNCGO76070 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC10.27□□□□□ -0.77
SNCGO76070 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC10.27□□□□□ -0.77
SNCGO76070 LAMA4-219ENST00000522006 6438 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
SNCGO76070 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
SNCGO76070 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC10.26□□□□□ -0.77
SNCGO76070 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC10.26□□□□□ -0.77
SNCGO76070 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC10.26□□□□□ -0.77
SNCGO76070 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC10.26□□□□□ -0.77
SNCGO76070 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC10.26□□□□□ -0.77
SNCGO76070 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC10.26□□□□□ -0.77
SNCGO76070 TIAM2-202ENST00000318981 5916 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
SNCGO76070 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 OR4D9-203ENST00000641962 6123 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
SNCGO76070 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC10.26□□□□□ -0.77
SNCGO76070 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
SNCGO76070 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
SNCGO76070 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC10.26□□□□□ -0.77
SNCGO76070 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC10.26□□□□□ -0.77
SNCGO76070 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC10.26□□□□□ -0.77
SNCGO76070 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC10.26□□□□□ -0.77
SNCGO76070 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
SNCGO76070 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC10.26□□□□□ -0.77
SNCGO76070 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC10.26□□□□□ -0.77
SNCGO76070 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC10.26□□□□□ -0.77
SNCGO76070 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
SNCGO76070 AC079602.3-201ENST00000623931 403 ntBASIC10.26□□□□□ -0.77
SNCGO76070 AC141257.4-201ENST00000634557 245 ntBASIC10.26□□□□□ -0.77
SNCGO76070 AC136944.6-201ENST00000634818 245 ntBASIC10.26□□□□□ -0.77
SNCGO76070 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
SNCGO76070 AC090616.6-203ENST00000579186 1945 ntBASIC10.26□□□□□ -0.77
SNCGO76070 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
SNCGO76070 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
SNCGO76070 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
SNCGO76070 EDRF1-201ENST00000337623 4387 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
SNCGO76070 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
SNCGO76070 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
SNCGO76070 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC10.26□□□□□ -0.77
SNCGO76070 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC10.26□□□□□ -0.77
SNCGO76070 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC10.26□□□□□ -0.77
SNCGO76070 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
SNCGO76070 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC10.26□□□□□ -0.77
SNCGO76070 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC10.26□□□□□ -0.77
SNCGO76070 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC10.26□□□□□ -0.77
SNCGO76070 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
SNCGO76070 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SNCGO76070 AC105250.1-201ENST00000509378 2057 ntBASIC10.26□□□□□ -0.77
SNCGO76070 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SNCGO76070 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SNCGO76070 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC10.25□□□□□ -0.77
SNCGO76070 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
SNCGO76070 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC10.25□□□□□ -0.77
SNCGO76070 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC10.25□□□□□ -0.77
SNCGO76070 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC10.25□□□□□ -0.77
SNCGO76070 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SNCGO76070 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC10.25□□□□□ -0.77
SNCGO76070 HSPA4-201ENST00000304858 4825 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SNCGO76070 PLEC-203ENST00000354589 14736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SNCGO76070 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SNCGO76070 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SNCGO76070 LGALS8-AS1-201ENST00000487567 1457 ntBASIC10.25□□□□□ -0.77
SNCGO76070 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SNCGO76070 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SNCGO76070 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC10.25□□□□□ -0.77
SNCGO76070 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SNCGO76070 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SNCGO76070 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms