Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.64■□□□□ 0.41
CTNND1O60716 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CTNND1O60716 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNND1O60716 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNND1O60716 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNND1O60716 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNND1O60716 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CTNND1O60716 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTNND1O60716 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTNND1O60716 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.63■□□□□ 0.41
CTNND1O60716 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTNND1O60716 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTNND1O60716 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTNND1O60716 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTNND1O60716 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CTNND1O60716 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.63■□□□□ 0.41
CTNND1O60716 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTNND1O60716 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTNND1O60716 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTNND1O60716 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTNND1O60716 PAUPAR-201ENST00000630360 2965 ntBASIC17.63■□□□□ 0.41
CTNND1O60716 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.63■□□□□ 0.41
CTNND1O60716 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.63■□□□□ 0.41
CTNND1O60716 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.63■□□□□ 0.41
CTNND1O60716 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTNND1O60716 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTNND1O60716 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.63■□□□□ 0.41
CTNND1O60716 ACTG1P2-201ENST00000415776 1125 ntBASIC17.63■□□□□ 0.41
CTNND1O60716 ACTG1P11-201ENST00000425411 1125 ntBASIC17.63■□□□□ 0.41
CTNND1O60716 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.63■□□□□ 0.41
CTNND1O60716 PUDPP3-201ENST00000445368 636 ntBASIC17.63■□□□□ 0.41
CTNND1O60716 AC134698.3-201ENST00000523880 214 ntBASIC17.63■□□□□ 0.41
CTNND1O60716 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTNND1O60716 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTNND1O60716 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTNND1O60716 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.63■□□□□ 0.41
CTNND1O60716 AC090164.2-201ENST00000611487 516 ntBASIC17.63■□□□□ 0.41
CTNND1O60716 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.63■□□□□ 0.41
CTNND1O60716 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.63■□□□□ 0.41
CTNND1O60716 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTNND1O60716 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTNND1O60716 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTNND1O60716 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.63■□□□□ 0.41
CTNND1O60716 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CTNND1O60716 AC009093.2-202ENST00000620513 2079 ntBASIC17.63■□□□□ 0.41
CTNND1O60716 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTNND1O60716 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CTNND1O60716 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTNND1O60716 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTNND1O60716 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTNND1O60716 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTNND1O60716 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTNND1O60716 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.62■□□□□ 0.41
CTNND1O60716 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CTNND1O60716 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CTNND1O60716 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTNND1O60716 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTNND1O60716 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTNND1O60716 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CTNND1O60716 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CTNND1O60716 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTNND1O60716 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.62■□□□□ 0.41
CTNND1O60716 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CTNND1O60716 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.62■□□□□ 0.41
CTNND1O60716 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTNND1O60716 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.62■□□□□ 0.41
CTNND1O60716 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CTNND1O60716 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.62■□□□□ 0.41
CTNND1O60716 AC125604.1-201ENST00000496255 707 ntBASIC17.62■□□□□ 0.41
CTNND1O60716 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.62■□□□□ 0.41
CTNND1O60716 FGFR3P5-201ENST00000564496 886 ntBASIC17.62■□□□□ 0.41
CTNND1O60716 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.62■□□□□ 0.41
CTNND1O60716 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
CTNND1O60716 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CTNND1O60716 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.62■□□□□ 0.41
CTNND1O60716 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.62■□□□□ 0.41
CTNND1O60716 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
CTNND1O60716 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.62■□□□□ 0.41
CTNND1O60716 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.62■□□□□ 0.41
CTNND1O60716 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTNND1O60716 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTNND1O60716 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.62■□□□□ 0.41
CTNND1O60716 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTNND1O60716 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.62■□□□□ 0.41
CTNND1O60716 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CTNND1O60716 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTNND1O60716 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTNND1O60716 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTNND1O60716 AC011840.2-201ENST00000563063 1520 ntBASIC17.62■□□□□ 0.41
CTNND1O60716 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.62■□□□□ 0.41
CTNND1O60716 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CTNND1O60716 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTNND1O60716 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTNND1O60716 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTNND1O60716 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTNND1O60716 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CTNND1O60716 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.61■□□□□ 0.41
CTNND1O60716 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTNND1O60716 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.61■□□□□ 0.41
CTNND1O60716 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms