Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.54□□□□□ -0.08
LCMT2O60294 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.54□□□□□ -0.08
LCMT2O60294 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.54□□□□□ -0.08
LCMT2O60294 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.54□□□□□ -0.08
LCMT2O60294 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LCMT2O60294 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LCMT2O60294 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LCMT2O60294 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LCMT2O60294 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LCMT2O60294 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.54□□□□□ -0.08
LCMT2O60294 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.54□□□□□ -0.08
LCMT2O60294 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LCMT2O60294 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
LCMT2O60294 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LCMT2O60294 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LCMT2O60294 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LCMT2O60294 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.54□□□□□ -0.08
LCMT2O60294 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LCMT2O60294 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.54□□□□□ -0.08
LCMT2O60294 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LCMT2O60294 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LCMT2O60294 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
LCMT2O60294 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LCMT2O60294 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LCMT2O60294 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LCMT2O60294 LINC02228-204ENST00000642115 2962 ntBASIC14.53□□□□□ -0.08
LCMT2O60294 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LCMT2O60294 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LCMT2O60294 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.53□□□□□ -0.08
LCMT2O60294 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LCMT2O60294 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LCMT2O60294 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.53□□□□□ -0.08
LCMT2O60294 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LCMT2O60294 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.53□□□□□ -0.08
LCMT2O60294 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LCMT2O60294 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LCMT2O60294 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LCMT2O60294 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
LCMT2O60294 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LCMT2O60294 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
LCMT2O60294 LRRC59-203ENST00000576448 1531 ntBASIC14.53□□□□□ -0.08
LCMT2O60294 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
LCMT2O60294 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.53□□□□□ -0.08
LCMT2O60294 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LCMT2O60294 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LCMT2O60294 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LCMT2O60294 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.53□□□□□ -0.08
LCMT2O60294 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LCMT2O60294 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.53□□□□□ -0.08
LCMT2O60294 BCRP2-202ENST00000447763 634 ntBASIC14.53□□□□□ -0.08
LCMT2O60294 AC106760.1-201ENST00000508690 800 ntBASIC14.53□□□□□ -0.08
LCMT2O60294 BCRP6-201ENST00000510112 632 ntBASIC14.53□□□□□ -0.08
LCMT2O60294 BCRP7-201ENST00000511549 544 ntBASIC14.53□□□□□ -0.08
LCMT2O60294 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.53□□□□□ -0.08
LCMT2O60294 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LCMT2O60294 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LCMT2O60294 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LCMT2O60294 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.53□□□□□ -0.08
LCMT2O60294 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LCMT2O60294 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
LCMT2O60294 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.53□□□□□ -0.08
LCMT2O60294 AC015936.2-201ENST00000593177 259 ntBASIC14.53□□□□□ -0.08
LCMT2O60294 BTNL10-201ENST00000595971 695 ntBASIC14.53□□□□□ -0.08
LCMT2O60294 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LCMT2O60294 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.53□□□□□ -0.08
LCMT2O60294 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LCMT2O60294 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LCMT2O60294 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LCMT2O60294 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.53□□□□□ -0.08
LCMT2O60294 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LCMT2O60294 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LCMT2O60294 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LCMT2O60294 AL365209.1-201ENST00000624418 6473 ntBASIC14.53□□□□□ -0.08
LCMT2O60294 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LCMT2O60294 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.53□□□□□ -0.08
LCMT2O60294 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LCMT2O60294 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.52□□□□□ -0.08
LCMT2O60294 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LCMT2O60294 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
LCMT2O60294 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LCMT2O60294 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LCMT2O60294 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.52□□□□□ -0.08
LCMT2O60294 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LCMT2O60294 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
LCMT2O60294 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
LCMT2O60294 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LCMT2O60294 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LCMT2O60294 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
LCMT2O60294 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LCMT2O60294 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
LCMT2O60294 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LCMT2O60294 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LCMT2O60294 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LCMT2O60294 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
LCMT2O60294 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.52□□□□□ -0.09
LCMT2O60294 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.52□□□□□ -0.09
LCMT2O60294 AC005034.1-201ENST00000426657 489 ntBASIC14.52□□□□□ -0.09
LCMT2O60294 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
LCMT2O60294 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.52□□□□□ -0.09
LCMT2O60294 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms