Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF13O43567 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF13O43567 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.9□□□□□ -0.18
RNF13O43567 AC005840.4-201ENST00000541242 2494 ntBASIC13.9□□□□□ -0.18
RNF13O43567 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF13O43567 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF13O43567 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RNF13O43567 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
RNF13O43567 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF13O43567 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF13O43567 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF13O43567 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF13O43567 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF13O43567 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RNF13O43567 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
RNF13O43567 AC117489.1-201ENST00000625169 3217 ntBASIC13.9□□□□□ -0.18
RNF13O43567 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF13O43567 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RNF13O43567 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF13O43567 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.9□□□□□ -0.18
RNF13O43567 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.9□□□□□ -0.18
RNF13O43567 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.9□□□□□ -0.18
RNF13O43567 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.9□□□□□ -0.18
RNF13O43567 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.9□□□□□ -0.18
RNF13O43567 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF13O43567 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.9□□□□□ -0.18
RNF13O43567 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.9□□□□□ -0.18
RNF13O43567 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.9□□□□□ -0.18
RNF13O43567 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.9□□□□□ -0.18
RNF13O43567 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
RNF13O43567 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF13O43567 BTBD7P1-201ENST00000447253 1453 ntBASIC13.9□□□□□ -0.18
RNF13O43567 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF13O43567 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
RNF13O43567 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.9□□□□□ -0.18
RNF13O43567 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF13O43567 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF13O43567 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF13O43567 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF13O43567 AC041040.2-201ENST00000622926 2899 ntBASIC13.9□□□□□ -0.18
RNF13O43567 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF13O43567 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF13O43567 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNF13O43567 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.9□□□□□ -0.18
RNF13O43567 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNF13O43567 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.9□□□□□ -0.18
RNF13O43567 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.9□□□□□ -0.19
RNF13O43567 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.19
RNF13O43567 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
RNF13O43567 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.9□□□□□ -0.19
RNF13O43567 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.9□□□□□ -0.19
RNF13O43567 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
RNF13O43567 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
RNF13O43567 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
RNF13O43567 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
RNF13O43567 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF13O43567 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF13O43567 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.89□□□□□ -0.19
RNF13O43567 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
RNF13O43567 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF13O43567 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RNF13O43567 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF13O43567 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF13O43567 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RNF13O43567 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RNF13O43567 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF13O43567 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF13O43567 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF13O43567 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF13O43567 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF13O43567 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF13O43567 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNF13O43567 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF13O43567 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF13O43567 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF13O43567 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RNF13O43567 TSSK5P-201ENST00000423978 907 ntBASIC13.89□□□□□ -0.19
RNF13O43567 GHSR-202ENST00000427970 912 ntBASIC13.89□□□□□ -0.19
RNF13O43567 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.89□□□□□ -0.19
RNF13O43567 AC114501.2-201ENST00000439631 535 ntBASIC13.89□□□□□ -0.19
RNF13O43567 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
RNF13O43567 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.89□□□□□ -0.19
RNF13O43567 AC009477.1-201ENST00000452936 217 ntBASIC13.89□□□□□ -0.19
RNF13O43567 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.89□□□□□ -0.19
RNF13O43567 AC135586.1-201ENST00000539323 574 ntBASIC13.89□□□□□ -0.19
RNF13O43567 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNF13O43567 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RNF13O43567 GPALPP1-207ENST00000611650 899 ntBASIC13.89□□□□□ -0.19
RNF13O43567 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.89□□□□□ -0.19
RNF13O43567 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF13O43567 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF13O43567 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF13O43567 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RNF13O43567 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF13O43567 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF13O43567 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF13O43567 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
RNF13O43567 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF13O43567 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms