Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMAD6O43541 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMAD6O43541 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMAD6O43541 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SMAD6O43541 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SMAD6O43541 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMAD6O43541 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMAD6O43541 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMAD6O43541 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMAD6O43541 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMAD6O43541 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMAD6O43541 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.28■□□□□ 0.04
SMAD6O43541 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMAD6O43541 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.28■□□□□ 0.04
SMAD6O43541 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMAD6O43541 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.28■□□□□ 0.04
SMAD6O43541 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.28■□□□□ 0.04
SMAD6O43541 AC104640.1-201ENST00000562617 2109 ntBASIC15.28■□□□□ 0.04
SMAD6O43541 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.28■□□□□ 0.04
SMAD6O43541 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMAD6O43541 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMAD6O43541 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.28■□□□□ 0.04
SMAD6O43541 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
SMAD6O43541 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMAD6O43541 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SMAD6O43541 FKBP4P6-201ENST00000457486 1332 ntBASIC15.28■□□□□ 0.04
SMAD6O43541 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMAD6O43541 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMAD6O43541 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMAD6O43541 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMAD6O43541 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMAD6O43541 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.28■□□□□ 0.04
SMAD6O43541 AL355994.2-201ENST00000447882 704 ntBASIC15.28■□□□□ 0.04
SMAD6O43541 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMAD6O43541 FTLP10-202ENST00000505798 471 ntBASIC15.28■□□□□ 0.04
SMAD6O43541 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
SMAD6O43541 RN7SL560P-201ENST00000577943 264 ntBASIC15.28■□□□□ 0.04
SMAD6O43541 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.28■□□□□ 0.04
SMAD6O43541 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.28■□□□□ 0.04
SMAD6O43541 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.28■□□□□ 0.04
SMAD6O43541 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.28■□□□□ 0.04
SMAD6O43541 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.28■□□□□ 0.04
SMAD6O43541 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMAD6O43541 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMAD6O43541 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMAD6O43541 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMAD6O43541 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMAD6O43541 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.28■□□□□ 0.04
SMAD6O43541 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMAD6O43541 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.28■□□□□ 0.04
SMAD6O43541 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMAD6O43541 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMAD6O43541 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMAD6O43541 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SMAD6O43541 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SMAD6O43541 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMAD6O43541 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SMAD6O43541 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.27■□□□□ 0.04
SMAD6O43541 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SMAD6O43541 AC020910.5-201ENST00000623668 1865 ntBASIC15.27■□□□□ 0.04
SMAD6O43541 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.27■□□□□ 0.04
SMAD6O43541 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.27■□□□□ 0.04
SMAD6O43541 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SMAD6O43541 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SMAD6O43541 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMAD6O43541 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMAD6O43541 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMAD6O43541 FAM86MP-201ENST00000340703 885 ntBASIC15.27■□□□□ 0.04
SMAD6O43541 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SMAD6O43541 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.27■□□□□ 0.04
SMAD6O43541 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SMAD6O43541 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SMAD6O43541 AC092658.1-201ENST00000505836 891 ntBASIC15.27■□□□□ 0.04
SMAD6O43541 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.27■□□□□ 0.04
SMAD6O43541 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SMAD6O43541 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.27■□□□□ 0.04
SMAD6O43541 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.27■□□□□ 0.04
SMAD6O43541 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.27■□□□□ 0.04
SMAD6O43541 MIR4538-201ENST00000581377 78 ntBASIC15.27■□□□□ 0.04
SMAD6O43541 RN7SL713P-201ENST00000582127 302 ntBASIC15.27■□□□□ 0.04
SMAD6O43541 MIR6799-201ENST00000620297 69 ntBASIC15.27■□□□□ 0.04
SMAD6O43541 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.27■□□□□ 0.04
SMAD6O43541 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SMAD6O43541 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SMAD6O43541 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMAD6O43541 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SMAD6O43541 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMAD6O43541 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMAD6O43541 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMAD6O43541 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMAD6O43541 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.27■□□□□ 0.03
SMAD6O43541 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMAD6O43541 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SMAD6O43541 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.27■□□□□ 0.03
SMAD6O43541 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMAD6O43541 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.26■□□□□ 0.03
SMAD6O43541 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.26■□□□□ 0.03
SMAD6O43541 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMAD6O43541 TCAF2P1-201ENST00000291129 2421 ntBASIC15.26■□□□□ 0.03
SMAD6O43541 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms