Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC23.59■■□□□ 1.37
CHD1O14646 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC23.59■■□□□ 1.37
CHD1O14646 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC23.58■■□□□ 1.37
CHD1O14646 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHD1O14646 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHD1O14646 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHD1O14646 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHD1O14646 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHD1O14646 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC23.58■■□□□ 1.37
CHD1O14646 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CHD1O14646 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC23.58■■□□□ 1.37
CHD1O14646 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHD1O14646 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHD1O14646 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHD1O14646 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHD1O14646 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHD1O14646 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC23.58■■□□□ 1.37
CHD1O14646 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHD1O14646 MAGEA7P-201ENST00000436482 942 ntBASIC23.58■■□□□ 1.37
CHD1O14646 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
CHD1O14646 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC23.58■■□□□ 1.37
CHD1O14646 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHD1O14646 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC23.58■■□□□ 1.37
CHD1O14646 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHD1O14646 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
CHD1O14646 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.36
CHD1O14646 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHD1O14646 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CHD1O14646 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
CHD1O14646 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHD1O14646 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC23.57■■□□□ 1.36
CHD1O14646 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
CHD1O14646 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC23.57■■□□□ 1.36
CHD1O14646 GAS5-209ENST00000430245 723 ntTSL 3 BASIC23.57■■□□□ 1.36
CHD1O14646 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CHD1O14646 AC025186.1-201ENST00000478174 870 ntBASIC23.57■■□□□ 1.36
CHD1O14646 RN7SL767P-201ENST00000493013 295 ntBASIC23.57■■□□□ 1.36
CHD1O14646 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC23.57■■□□□ 1.36
CHD1O14646 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC23.57■■□□□ 1.36
CHD1O14646 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHD1O14646 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC23.57■■□□□ 1.36
CHD1O14646 RN7SL602P-201ENST00000578326 324 ntBASIC23.57■■□□□ 1.36
CHD1O14646 RN7SL718P-201ENST00000581254 303 ntBASIC23.57■■□□□ 1.36
CHD1O14646 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC23.57■■□□□ 1.36
CHD1O14646 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC23.57■■□□□ 1.36
CHD1O14646 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHD1O14646 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHD1O14646 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC23.57■■□□□ 1.36
CHD1O14646 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHD1O14646 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHD1O14646 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
CHD1O14646 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CHD1O14646 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC23.57■■□□□ 1.36
CHD1O14646 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHD1O14646 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHD1O14646 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC23.57■■□□□ 1.36
CHD1O14646 AC067931.2-201ENST00000623655 2003 ntBASIC23.57■■□□□ 1.36
CHD1O14646 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHD1O14646 AR-207ENST00000612010 3896 ntTSL 5 BASIC23.57■■□□□ 1.36
CHD1O14646 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC23.56■■□□□ 1.36
CHD1O14646 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHD1O14646 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC23.56■■□□□ 1.36
CHD1O14646 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC23.56■■□□□ 1.36
CHD1O14646 NEK4P3-201ENST00000604859 544 ntBASIC23.56■■□□□ 1.36
CHD1O14646 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC23.56■■□□□ 1.36
CHD1O14646 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC23.56■■□□□ 1.36
CHD1O14646 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CHD1O14646 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
CHD1O14646 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
CHD1O14646 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC23.56■■□□□ 1.36
CHD1O14646 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHD1O14646 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
CHD1O14646 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CHD1O14646 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHD1O14646 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CHD1O14646 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHD1O14646 MSANTD2P1-201ENST00000445341 1368 ntBASIC23.56■■□□□ 1.36
CHD1O14646 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC23.56■■□□□ 1.36
CHD1O14646 BAX-205ENST00000391871 687 ntTSL 5 BASIC23.56■■□□□ 1.36
CHD1O14646 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC23.56■■□□□ 1.36
CHD1O14646 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CHD1O14646 SNORD3B-1-201ENST00000577988 758 ntBASIC23.56■■□□□ 1.36
CHD1O14646 MIR4254-201ENST00000581063 76 ntBASIC23.56■■□□□ 1.36
CHD1O14646 AC005274.1-201ENST00000623460 802 ntBASIC23.56■■□□□ 1.36
CHD1O14646 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
CHD1O14646 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHD1O14646 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHD1O14646 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC23.55■■□□□ 1.36
CHD1O14646 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHD1O14646 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC23.55■■□□□ 1.36
CHD1O14646 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHD1O14646 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
CHD1O14646 HLF-202ENST00000430986 1385 ntTSL 2 BASIC23.55■■□□□ 1.36
CHD1O14646 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC23.55■■□□□ 1.36
CHD1O14646 RPL3P2-204ENST00000413027 1203 ntBASIC23.55■■□□□ 1.36
CHD1O14646 PSAT1P2-201ENST00000426107 972 ntBASIC23.55■■□□□ 1.36
CHD1O14646 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHD1O14646 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC23.55■■□□□ 1.36
CHD1O14646 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC23.55■■□□□ 1.36
CHD1O14646 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms