Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
O00370 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
O00370 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.21■□□□□ 0.19
O00370 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
O00370 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
O00370 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
O00370 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
O00370 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
O00370 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.21■□□□□ 0.19
O00370 AL139094.1-201ENST00000405549 1188 ntBASIC16.21■□□□□ 0.19
O00370 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.21■□□□□ 0.19
O00370 INE1-201ENST00000456273 945 ntBASIC16.21■□□□□ 0.19
O00370 AC093433.1-201ENST00000458048 571 ntBASIC16.21■□□□□ 0.19
O00370 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.21■□□□□ 0.19
O00370 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
O00370 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
O00370 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.21■□□□□ 0.19
O00370 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
O00370 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.21■□□□□ 0.19
O00370 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.21■□□□□ 0.19
O00370 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
O00370 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
O00370 MIR5189-201ENST00000577370 114 ntBASIC16.21■□□□□ 0.19
O00370 AC010319.3-201ENST00000597028 470 ntBASIC16.21■□□□□ 0.19
O00370 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.21■□□□□ 0.19
O00370 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.21■□□□□ 0.19
O00370 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
O00370 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
O00370 REXO1L5P-201ENST00000622260 2098 ntBASIC16.21■□□□□ 0.19
O00370 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
O00370 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
O00370 AC013726.1-201ENST00000563747 2285 ntBASIC16.21■□□□□ 0.19
O00370 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
O00370 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
O00370 CICP4-201ENST00000447359 2812 ntBASIC16.21■□□□□ 0.19
O00370 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.21■□□□□ 0.18
O00370 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.21■□□□□ 0.18
O00370 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.21■□□□□ 0.18
O00370 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.21■□□□□ 0.18
O00370 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.21■□□□□ 0.18
O00370 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
O00370 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
O00370 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.21■□□□□ 0.18
O00370 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
O00370 AC104581.4-201ENST00000623126 3052 ntBASIC16.2■□□□□ 0.18
O00370 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.2■□□□□ 0.18
O00370 CU639417.3-201ENST00000624240 1404 ntBASIC16.2■□□□□ 0.18
O00370 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
O00370 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
O00370 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
O00370 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
O00370 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
O00370 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
O00370 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
O00370 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
O00370 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
O00370 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
O00370 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
O00370 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.2■□□□□ 0.18
O00370 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
O00370 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
O00370 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
O00370 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
O00370 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
O00370 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.2■□□□□ 0.18
O00370 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
O00370 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.2■□□□□ 0.18
O00370 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
O00370 AL390755.1-201ENST00000623716 2027 ntBASIC16.2■□□□□ 0.18
O00370 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.2■□□□□ 0.18
O00370 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
O00370 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
O00370 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
O00370 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.2■□□□□ 0.18
O00370 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
O00370 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.2■□□□□ 0.18
O00370 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
O00370 NME2P1-201ENST00000426182 414 ntBASIC16.2■□□□□ 0.18
O00370 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.2■□□□□ 0.18
O00370 ACTG1P3-201ENST00000431775 1114 ntBASIC16.2■□□□□ 0.18
O00370 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.2■□□□□ 0.18
O00370 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
O00370 AC011495.1-201ENST00000498085 584 ntBASIC16.2■□□□□ 0.18
O00370 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.2■□□□□ 0.18
O00370 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
O00370 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
O00370 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
O00370 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
O00370 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
O00370 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
O00370 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.2■□□□□ 0.18
O00370 AP005019.2-201ENST00000615104 511 ntBASIC16.2■□□□□ 0.18
O00370 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
O00370 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
O00370 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
O00370 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
O00370 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
O00370 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
O00370 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
O00370 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms