Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM1O00151 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.58□□□□□ -0.08
PDLIM1O00151 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM1O00151 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.08
PDLIM1O00151 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM1O00151 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM1O00151 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
PDLIM1O00151 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM1O00151 CNN2P11-201ENST00000429351 262 ntBASIC14.58□□□□□ -0.08
PDLIM1O00151 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.58□□□□□ -0.08
PDLIM1O00151 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.58□□□□□ -0.08
PDLIM1O00151 SPDYE11-202ENST00000450699 704 ntBASIC14.58□□□□□ -0.08
PDLIM1O00151 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.58□□□□□ -0.08
PDLIM1O00151 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM1O00151 AC079140.1-201ENST00000508039 487 ntBASIC14.58□□□□□ -0.08
PDLIM1O00151 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.58□□□□□ -0.08
PDLIM1O00151 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM1O00151 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM1O00151 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.58□□□□□ -0.08
PDLIM1O00151 SPDYE9P-201ENST00000570642 692 ntBASIC14.58□□□□□ -0.08
PDLIM1O00151 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.58□□□□□ -0.08
PDLIM1O00151 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.58□□□□□ -0.08
PDLIM1O00151 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.58□□□□□ -0.08
PDLIM1O00151 SPDYE10P-202ENST00000612005 668 ntBASIC14.58□□□□□ -0.08
PDLIM1O00151 SPDYE8P-202ENST00000612377 668 ntBASIC14.58□□□□□ -0.08
PDLIM1O00151 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.58□□□□□ -0.08
PDLIM1O00151 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM1O00151 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.58□□□□□ -0.08
PDLIM1O00151 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM1O00151 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PDLIM1O00151 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.58□□□□□ -0.08
PDLIM1O00151 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.58□□□□□ -0.08
PDLIM1O00151 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM1O00151 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM1O00151 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM1O00151 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM1O00151 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM1O00151 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM1O00151 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM1O00151 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM1O00151 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM1O00151 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDLIM1O00151 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
PDLIM1O00151 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.58□□□□□ -0.08
PDLIM1O00151 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
PDLIM1O00151 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.57□□□□□ -0.08
PDLIM1O00151 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PDLIM1O00151 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.57□□□□□ -0.08
PDLIM1O00151 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM1O00151 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM1O00151 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.57□□□□□ -0.08
PDLIM1O00151 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.57□□□□□ -0.08
PDLIM1O00151 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM1O00151 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM1O00151 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM1O00151 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM1O00151 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM1O00151 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.57□□□□□ -0.08
PDLIM1O00151 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM1O00151 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM1O00151 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PDLIM1O00151 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM1O00151 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM1O00151 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.57□□□□□ -0.08
PDLIM1O00151 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
PDLIM1O00151 SPCS2P4-201ENST00000436160 681 ntBASIC14.57□□□□□ -0.08
PDLIM1O00151 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.57□□□□□ -0.08
PDLIM1O00151 TIMM8BP1-201ENST00000452384 211 ntBASIC14.57□□□□□ -0.08
PDLIM1O00151 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
PDLIM1O00151 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.57□□□□□ -0.08
PDLIM1O00151 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PDLIM1O00151 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.57□□□□□ -0.08
PDLIM1O00151 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.57□□□□□ -0.08
PDLIM1O00151 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PDLIM1O00151 AC084121.4-201ENST00000641598 221 ntBASIC14.57□□□□□ -0.08
PDLIM1O00151 AF228730.8-201ENST00000642140 221 ntBASIC14.57□□□□□ -0.08
PDLIM1O00151 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM1O00151 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.57□□□□□ -0.08
PDLIM1O00151 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM1O00151 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM1O00151 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM1O00151 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM1O00151 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM1O00151 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.57□□□□□ -0.08
PDLIM1O00151 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.57□□□□□ -0.08
PDLIM1O00151 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM1O00151 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM1O00151 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.57□□□□□ -0.08
PDLIM1O00151 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM1O00151 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM1O00151 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM1O00151 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PDLIM1O00151 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM1O00151 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM1O00151 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
PDLIM1O00151 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.56□□□□□ -0.08
PDLIM1O00151 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
PDLIM1O00151 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM1O00151 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM1O00151 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms