Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC10.85□□□□□ -0.67
LYRM9A8MSI8 RN7SL48P-201ENST00000579283 293 ntBASIC10.85□□□□□ -0.67
LYRM9A8MSI8 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
LYRM9A8MSI8 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
LYRM9A8MSI8 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LYRM9A8MSI8 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LYRM9A8MSI8 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LYRM9A8MSI8 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LYRM9A8MSI8 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LYRM9A8MSI8 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LYRM9A8MSI8 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC10.85□□□□□ -0.67
LYRM9A8MSI8 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC10.85□□□□□ -0.67
LYRM9A8MSI8 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LYRM9A8MSI8 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LYRM9A8MSI8 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC10.85□□□□□ -0.67
LYRM9A8MSI8 AP000845.1-201ENST00000581677 2131 ntBASIC10.85□□□□□ -0.67
LYRM9A8MSI8 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC10.85□□□□□ -0.67
LYRM9A8MSI8 AC013268.4-201ENST00000637413 2228 ntBASIC10.85□□□□□ -0.67
LYRM9A8MSI8 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LYRM9A8MSI8 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC10.85□□□□□ -0.67
LYRM9A8MSI8 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LYRM9A8MSI8 SBF1P1-201ENST00000444527 5631 ntBASIC10.85□□□□□ -0.67
LYRM9A8MSI8 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC10.85□□□□□ -0.67
LYRM9A8MSI8 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LYRM9A8MSI8 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 KCP-203ENST00000610776 5108 ntTSL 5 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 AC234783.1-201ENST00000441761 496 ntBASIC10.84□□□□□ -0.67
LYRM9A8MSI8 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 RPL28-206ENST00000558752 671 ntTSL 3 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 RPS15-202ENST00000585665 467 ntTSL 3 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 APOC4-201ENST00000591600 348 ntTSL 3 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 AL162274.1-201ENST00000617191 1098 ntBASIC10.84□□□□□ -0.67
LYRM9A8MSI8 RPSAP52-203ENST00000622976 1023 ntBASIC10.84□□□□□ -0.67
LYRM9A8MSI8 AC132938.4-201ENST00000623835 848 ntBASIC10.84□□□□□ -0.67
LYRM9A8MSI8 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 AC018665.1-201ENST00000622927 1362 ntBASIC10.84□□□□□ -0.67
LYRM9A8MSI8 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 AC006058.4-201ENST00000624016 1670 ntBASIC10.84□□□□□ -0.67
LYRM9A8MSI8 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 REXO1L2P-201ENST00000425429 2069 ntBASIC10.84□□□□□ -0.67
LYRM9A8MSI8 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
LYRM9A8MSI8 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms